Measuring Performance Metrics of Machine Learning Algorithms for Detecting and Classifying Transposable Elements

by Simon Orozco-Arias, Johan S. Piña, Reinel Tabares-Soto, Luis F. Castillo-Ossa, Romain Guyot, Gustavo Isaza
Published 2020-05-01

TIP_finder: An HPC Software to Detect Transposable Element Insertion Polymorphisms in Large Genomic Datasets

by Simon Orozco-Arias, Nicolas Tobon-Orozco, Johan S. Piña, Cristian Felipe Jiménez-Varón, Reinel Tabares-Soto, Romain Guyot
Published 2020-09-01

K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes

by Simon Orozco-Arias, Mariana S. Candamil-Cortés, Paula A. Jaimes, Johan S. Piña, Reinel Tabares-Soto, Romain Guyot, Gustavo Isaza
Published 2021-05-01