NGmerge: merging paired-end reads via novel empirically-derived models of sequencing errors

by John M. Gaspar
Published 2018-12-01

Assessing the consequences of denoising marker-based metagenomic data.

by John M Gaspar, W Kelley Thomas
Published 2013-01-01

DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data

by John M. Gaspar, Ronald P. Hart
Published 2017-11-01

Short paired-end reads trump long single-end reads for expression analysis

by Adam H. Freedman, John M. Gaspar, Timothy B. Sackton
Published 2020-04-01