Assessing Metagenomic Signals Recovered from Lyuba, a 42,000-Year-Old Permafrost-Preserved Woolly Mammoth Calf

by Giada Ferrari, Heidi E. L. Lischer, Judith Neukamm, Enrique Rayo, Nicole Borel, Andreas Pospischil, Frank Rühli, Abigail S. Bouwman, Michael G. Campana
Published 2018-08-01

Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager

by James A. Fellows Yates, Thiseas C. Lamnidis, Maxime Borry, Aida Andrades Valtueña, Zandra Fagernäs, Stephen Clayton, Maxime U. Garcia, Judith Neukamm, Alexander Peltzer
Published 2021-03-01

2000-year-old pathogen genomes reconstructed from metagenomic analysis of Egyptian mummified individuals

by Judith Neukamm, Saskia Pfrengle, Martyna Molak, Alexander Seitz, Michael Francken, Partick Eppenberger, Charlotte Avanzi, Ella Reiter, Christian Urban, Beatrix Welte, Philipp W. Stockhammer, Barbara Teßmann, Alexander Herbig, Katerina Harvati, Kay Nieselt, Johannes Krause, Verena J. Schuenemann
Published 2020-08-01

Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes

by Saskia Pfrengle, Judith Neukamm, Meriam Guellil, Marcel Keller, Martyna Molak, Charlotte Avanzi, Alena Kushniarevich, Núria Montes, Gunnar U. Neumann, Ella Reiter, Rezeda I. Tukhbatova, Nataliya Y. Berezina, Alexandra P. Buzhilova, Dmitry S. Korobov, Stian Suppersberger Hamre, Vitor M. J. Matos, Maria T. Ferreira, Laura González-Garrido, Sofia N. Wasterlain, Célia Lopes, Ana Luisa Santos, Nathalie Antunes-Ferreira, Vitória Duarte, Ana Maria Silva, Linda Melo, Natasa Sarkic, Lehti Saag, Kristiina Tambets, Philippe Busso, Stewart T. Cole, Alexei Avlasovich, Charlotte A. Roberts, Alison Sheridan, Craig Cessford, John Robb, Johannes Krause, Christiana L. Scheib, Sarah A. Inskip, Verena J. Schuenemann
Published 2021-10-01