Comparison of Database Search Methods for the Detection of Legionella pneumophila in Water Samples Using Metagenomic Analysis

by Jednipit Borthong, Ryosuke Omori, Ryosuke Omori, Chihiro Sugimoto, Chihiro Sugimoto, Orasa Suthienkul, Ryo Nakao, Kimihito Ito, Kimihito Ito, Kimihito Ito
Published 2018-06-01

Inferring epidemiological dynamics of infectious diseases using Tajima's D statistic on nucleotide sequences of pathogens

by Kiyeon Kim, Ryosuke Omori, Kimihito Ito
Published 2017-12-01

Estimating Transmission Potential of H5N1 Viruses Among Humans in Egypt Using Phylogeny, Genetic Distance and Sampling Time Interval

by Wessam Mohamed, Kimihito Ito, Ryosuke Omori
Published 2019-12-01

Can Machines Learn Respiratory Virus Epidemiology?: A Comparative Study of Likelihood-Free Methods for the Estimation of Epidemiological Dynamics

by Heidi L. Tessmer, Kimihito Ito, Ryosuke Omori, Ryosuke Omori
Published 2018-03-01

Resampling nucleotide sequences with closest-neighbor trimming and its comparison to other methods.

by Kouki Yonezawa, Manabu Igarashi, Keisuke Ueno, Ayato Takada, Kimihito Ito
Published 2013-01-01

Host-Specific and Segment-Specific Evolutionary Dynamics of Avian and Human Influenza A Viruses: A Systematic Review.

by Kiyeon Kim, Ryosuke Omori, Keisuke Ueno, Sayaka Iida, Kimihito Ito
Published 2016-01-01

Estimating the Lineage Dynamics of Human Influenza B Viruses.

by Mayumbo Nyirenda, Ryosuke Omori, Heidi L Tessmer, Hiroki Arimura, Kimihito Ito
Published 2016-01-01

Predicting the antigenic structure of the pandemic (H1N1) 2009 influenza virus hemagglutinin.

by Manabu Igarashi, Kimihito Ito, Reiko Yoshida, Daisuke Tomabechi, Hiroshi Kida, Ayato Takada
Published 2010-01-01

Identification of fungi in shotgun metagenomics datasets.

by Paul D Donovan, Gabriel Gonzalez, Desmond G Higgins, Geraldine Butler, Kimihito Ito
Published 2018-01-01

Gnarled-trunk evolutionary model of influenza A virus hemagglutinin.

by Kimihito Ito, Manabu Igarashi, Yutaka Miyazaki, Teiji Murakami, Syaka Iida, Hiroshi Kida, Ayato Takada
Published 2011-01-01

Cross-protective potential of a novel monoclonal antibody directed against antigenic site B of the hemagglutinin of influenza A viruses.

by Reiko Yoshida, Manabu Igarashi, Hiroichi Ozaki, Noriko Kishida, Daisuke Tomabechi, Hiroshi Kida, Kimihito Ito, Ayato Takada
Published 2009-03-01

Heterosubtypic antiviral activity of hemagglutinin-specific antibodies induced by intranasal immunization with inactivated influenza viruses in mice.

by Mieko Muramatsu, Reiko Yoshida, Hiroko Miyamoto, Daisuke Tomabechi, Masahiro Kajihara, Junki Maruyama, Takashi Kimura, Rashid Manzoor, Kimihito Ito, Ayato Takada
Published 2013-01-01

Distinct Lineages of Bufavirus in Wild Shrews and Nonhuman Primates

by Michihito Sasaki, Yasuko Orba, Paulina D. Anindita, Akihiro Ishii, Keisuke Ueno, Bernard M. Hang’ombe, Aaron S. Mweene, Kimihito Ito, Hirofumi Sawa
Published 2015-07-01

Influenza Virus Infection Induces a Narrow Antibody Response in Children but a Broad Recall Response in Adults

by Philip Meade, Guillermina Kuan, Shirin Strohmeier, Hannah E. Maier, Fatima Amanat, Angel Balmaseda, Kimihito Ito, Ericka Kirkpatrick, Andres Javier, Lionel Gresh, Raffael Nachbagauer, Aubree Gordon, Florian Krammer
Published 2020-01-01

Anthropogenic interferences lead to gut microbiome dysbiosis in Asian elephants and may alter adaptation processes to surrounding environments

by Mohamed Abdallah Mohamed Moustafa, Hla Myet Chel, May June Thu, Saw Bawm, Lat Lat Htun, Mar Mar Win, Zaw Min Oo, Natsuo Ohsawa, Mirkka Lahdenperä, Wessam Mohamed Ahmed Mohamed, Kimihito Ito, Nariaki Nonaka, Ryo Nakao, Ken Katakura
Published 2021-01-01