Application of information theoretical approaches to assess diversity and similarity in single-cell transcriptomics

by Michal T. Seweryn, Maciej Pietrzak, Qin Ma
Published 2020-01-01

High dimensional model representation of log-likelihood ratio: binary classification with expression data

by Ali Foroughi pour, Maciej Pietrzak, Lori A Dalton, Grzegorz A. Rempała
Published 2020-04-01

Epigenetic silencing of nucleolar rRNA genes in Alzheimer's disease.

by Maciej Pietrzak, Grzegorz Rempala, Peter T Nelson, Jing-Juan Zheng, Michal Hetman
Published 2011-01-01

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

by Venkat Sundar Gadepalli, Hatice Gulcin Ozer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
Published 2019-12-01

Differences in Expression Level of Helios and Neuropilin-1 Do Not Distinguish Thymus-Derived from Extrathymically-Induced CD4+Foxp3+ Regulatory T Cells.

by Edyta Szurek, Anna Cebula, Lukasz Wojciech, Maciej Pietrzak, Grzegorz Rempala, Pawel Kisielow, Leszek Ignatowicz
Published 2015-01-01

Non-canonicaly recruited TCRαβCD8αα IELs recognize microbial antigens

by Lukasz Wojciech, Edyta Szurek, Michal Kuczma, Anna Cebula, Wessam R. Elhefnawy, Maciej Pietrzak, Grzegorz Rempala, Leszek Ignatowicz
Published 2018-07-01

High dimensional model representation of log likelihood ratio: binary classification with SNP data

by Ali Foroughi pour, Maciej Pietrzak, Lara E. Sucheston-Campbell, Ezgi Karaesmen, Lori A. Dalton, Grzegorz A. Rempała
Published 2020-09-01

Dormant pathogenic CD4+ T cells are prevalent in the peripheral repertoire of healthy mice

by Anna Cebula, Michal Kuczma, Edyta Szurek, Maciej Pietrzak, Natasha Savage, Wessam R. Elhefnawy, Grzegorz Rempala, Piotr Kraj, Leszek Ignatowicz
Published 2019-10-01

Bone Morphogenic Proteins Are Immunoregulatory Cytokines Controlling FOXP3+ Treg Cells

by Lauren M. Browning, Caroline Miller, Michal Kuczma, Maciej Pietrzak, Yu Jing, Grzegorz Rempala, Pawel Muranski, Leszek Ignatowicz, Piotr Kraj
Published 2020-10-01

A nested case-control study of 277 prediagnostic serum cytokines and glioma.

by Judith Schwartzbaum, Min Wang, Elisabeth Root, Maciej Pietrzak, Grzegorz A Rempala, Ruo-Pan Huang, Tom Borge Johannesen, Tom K Grimsrud
Published 2017-01-01

Allele-Selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-Coding and Noncoding RNAs, and RNA Isoforms.

by Roshan Mascarenhas, Maciej Pietrzak, Ryan M Smith, Amy Webb, Danxin Wang, Audrey C Papp, Julia K Pinsonneault, Michal Seweryn, Grzegorz Rempala, Wolfgang Sadee
Published 2015-01-01

AmpliSeq transcriptome analysis of human alveolar and monocyte-derived macrophages over time in response to Mycobacterium tuberculosis infection.

by Audrey C Papp, Abul K Azad, Maciej Pietrzak, Amanda Williams, Samuel K Handelman, Robert P Igo, Catherine M Stein, Katherine Hartmann, Larry S Schlesinger, Wolfgang Sadee
Published 2018-01-01

Altered microRNA and mRNA profiles during heart failure in the human sinoatrial node

by Ning Li, Esthela Artiga, Anuradha Kalyanasundaram, Brian J. Hansen, Amy Webb, Maciej Pietrzak, Brandon Biesiadecki, Bryan Whitson, Nahush A. Mokadam, Paul M. L. Janssen, John D. Hummel, Peter J. Mohler, Halina Dobrzynski, Vadim V. Fedorov
Published 2021-09-01

Immune Recovery Following Autologous Hematopoietic Stem Cell Transplantation in HIV-Related Lymphoma Patients on the BMT CTN 0803/AMC 071 Trial

by Polina Shindiapina, Polina Shindiapina, Maciej Pietrzak, Michal Seweryn, Eric McLaughlin, Xiaoli Zhang, Mat Makowski, Elshafa Hassan Ahmed, Elshafa Hassan Ahmed, Sarah Schlotter, Rebecca Pearson, Rhonda Kitzler, Anna Mozhenkova, Jennifer Le-Rademacher, Richard F. Little, Gorgun Akpek, Ernesto Ayala, Steven M. Devine, Lawrence D. Kaplan, Ariela Noy, Uday R. Popat, Jack W. Hsu, Lawrence E. Morris, Adam M. Mendizabal, Amrita Krishnan, William Wachsman, William Wachsman, Nita Williams, Nidhi Sharma, Craig C. Hofmeister, Stephen J. Forman, Willis H. Navarro, Willis H. Navarro, Joseph C. Alvarnas, Richard F. Ambinder, Gerard Lozanski, Robert A. Baiocchi, Robert A. Baiocchi
Published 2021-09-01