Phage-induced expression of CRISPR-associated proteins is revealed by shotgun proteomics in Streptococcus thermophilus.

by Jacque C Young, Brian D Dill, Chongle Pan, Robert L Hettich, Jillian F Banfield, Manesh Shah, Christophe Fremaux, Philippe Horvath, Rodolphe Barrangou, Nathan C Verberkmoes
Published 2012-01-01

Wavelet-Based Genomic Signal Processing for Centromere Identification and Hypothesis Generation

by Deborah Weighill, Deborah Weighill, David Macaya-Sanz, Stephen Paul DiFazio, Wayne Joubert, Manesh Shah, Jeremy Schmutz, Jeremy Schmutz, Avinash Sreedasyam, Gerald Tuskan, Daniel Jacobson, Daniel Jacobson
Published 2019-05-01

Strategies for metagenomic-guided whole-community proteomics of complex microbial environments.

by Brandi L Cantarel, Alison R Erickson, Nathan C VerBerkmoes, Brian K Erickson, Patricia A Carey, Chongle Pan, Manesh Shah, Emmanuel F Mongodin, Janet K Jansson, Claire M Fraser-Liggett, Robert L Hettich
Published 2011-01-01

Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease.

by Alison R Erickson, Brandi L Cantarel, Regina Lamendella, Youssef Darzi, Emmanuel F Mongodin, Chongle Pan, Manesh Shah, Jonas Halfvarson, Curt Tysk, Bernard Henrissat, Jeroen Raes, Nathan C Verberkmoes, Claire M Fraser, Robert L Hettich, Janet K Jansson
Published 2012-01-01

Multi-Phenotype Association Decomposition: Unraveling Complex Gene-Phenotype Relationships

by Deborah Weighill, Deborah Weighill, Piet Jones, Piet Jones, Carissa Bleker, Carissa Bleker, Priya Ranjan, Priya Ranjan, Manesh Shah, Nan Zhao, Madhavi Martin, Stephen DiFazio, David Macaya-Sanz, Jeremy Schmutz, Jeremy Schmutz, Avinash Sreedasyam, Timothy Tschaplinski, Gerald Tuskan, Daniel Jacobson, Daniel Jacobson
Published 2019-05-01

Pleiotropic and Epistatic Network-Based Discovery: Integrated Networks for Target Gene Discovery

by Deborah Weighill, Deborah Weighill, Piet Jones, Piet Jones, Manesh Shah, Priya Ranjan, Priya Ranjan, Wellington Muchero, Jeremy Schmutz, Jeremy Schmutz, Avinash Sreedasyam, David Macaya-Sanz, Robert Sykes, Nan Zhao, Madhavi Z. Martin, Stephen DiFazio, Timothy J. Tschaplinski, Gerald Tuskan, Daniel Jacobson, Daniel Jacobson
Published 2018-05-01

Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence

by Anna Furches, Anna Furches, David Kainer, Deborah Weighill, Deborah Weighill, Annabel Large, Annabel Large, Annabel Large, Piet Jones, Piet Jones, Angelica M. Walker, Angelica M. Walker, Angelica M. Walker, Angelica M. Walker, Jonathon Romero, Jonathon Romero, Joao Gabriel Felipe Machado Gazolla, Wayne Joubert, Manesh Shah, Jared Streich, Priya Ranjan, Priya Ranjan, Jeremy Schmutz, Jeremy Schmutz, Avinash Sreedasyam, David Macaya-Sanz, Nan Zhao, Madhavi Z. Martin, Xiaolan Rao, Richard A. Dixon, Stephen DiFazio, Timothy J. Tschaplinski, Jin-Gui Chen, Gerald A. Tuskan, Daniel Jacobson, Daniel Jacobson
Published 2019-10-01