Divergent Genomic Adaptations in the Microbiomes of Arctic Subzero Sea-Ice and Cryopeg Brines

by Josephine Z. Rapp, Matthew B. Sullivan, Matthew B. Sullivan, Matthew B. Sullivan, Matthew B. Sullivan, Jody W. Deming
Published 2021-07-01

Emerging methods to study bacteriophage infection at the single-cell level

by Vinh Toan Dang, Matthew B Sullivan, Matthew B Sullivan
Published 2014-12-01

The Pacific Ocean virome (POV): a marine viral metagenomic dataset and associated protein clusters for quantitative viral ecology.

by Bonnie L Hurwitz, Matthew B Sullivan
Published 2013-01-01

Comparative Omics and Trait Analyses of Marine Pseudoalteromonas Phages Advance the Phage OTU Concept

by Melissa B. Duhaime, Natalie Solonenko, Simon Roux, Nathan C. Verberkmoes, Antje Wichels, Matthew B. Sullivan, Matthew B. Sullivan
Published 2017-07-01

Dietary energy drives the dynamic response of bovine rumen viral communities

by Christopher L. Anderson, Matthew B. Sullivan, Samodha C. Fernando
Published 2017-11-01

Viral dark matter and virus–host interactions resolved from publicly available microbial genomes

by Simon Roux, Steven J Hallam, Tanja Woyke, Matthew B Sullivan
Published 2015-07-01

VirSorter: mining viral signal from microbial genomic data

by Simon Roux, Francois Enault, Bonnie L. Hurwitz, Matthew B. Sullivan
Published 2015-05-01

Unveiling Infection Strategies across Diverse Marine Phage–Host Systems

by Cristina Howard-Varona, Karin Holmfeldt, Melissa B Duhaime, Matthew B Sullivan
Published 2020-06-01

Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity

by Simon Roux, Joanne B. Emerson, Emiley A. Eloe-Fadrosh, Matthew B. Sullivan
Published 2017-09-01

Smoking is associated with quantifiable differences in the human lung DNA virome and metabolome

by Ann C. Gregory, Matthew B. Sullivan, Leopoldo N. Segal, Brian C. Keller
Published 2018-09-01

Improving Phage-Biofilm In Vitro Experimentation

by Stephen T. Abedon, Katarzyna M. Danis-Wlodarczyk, Daniel J. Wozniak, Matthew B. Sullivan
Published 2021-06-01

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations.

by Matthew B Sullivan, Maureen L Coleman, Peter Weigele, Forest Rohwer, Sallie W Chisholm
Published 2005-05-01

vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria

by Benjamin Bolduc, Ho Bin Jang, Guilhem Doulcier, Zhi-Qiang You, Simon Roux, Matthew B. Sullivan
Published 2017-05-01

Optimization of viral resuspension methods for carbon-rich soils along a permafrost thaw gradient

by Gareth Trubl, Natalie Solonenko, Lauren Chittick, Sergei A. Solonenko, Virginia I. Rich, Matthew B. Sullivan
Published 2016-05-01

Spinal Cord Injury Changes the Structure and Functional Potential of Gut Bacterial and Viral Communities

by Jingjie Du, Ahmed A. Zayed, Kristina A. Kigerl, Kylie Zane, Matthew B. Sullivan, Phillip G. Popovich
Published 2021-06-01

Prevalence and evolution of core photosystem II genes in marine cyanobacterial viruses and their hosts.

by Matthew B Sullivan, Debbie Lindell, Jessica A Lee, Luke R Thompson, Joseph P Bielawski, Sallie W Chisholm
Published 2006-07-01

Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics

by Simon Roux, Leong-Keat Chan, Rob Egan, Rex R. Malmstrom, Katherine D. McMahon, Matthew B. Sullivan
Published 2017-10-01

Clean Low-Biomass Procedures and Their Application to Ancient Ice Core Microorganisms

by Zhi-Ping Zhong, Zhi-Ping Zhong, Natalie E. Solonenko, Maria C. Gazitúa, Donald V. Kenny, Ellen Mosley-Thompson, Ellen Mosley-Thompson, Virginia I. Rich, Virginia I. Rich, James L. Van Etten, Lonnie G. Thompson, Lonnie G. Thompson, Matthew B. Sullivan, Matthew B. Sullivan
Published 2018-05-01

Long-read viral metagenomics captures abundant and microdiverse viral populations and their niche-defining genomic islands

by Joanna Warwick-Dugdale, Natalie Solonenko, Karen Moore, Lauren Chittick, Ann C. Gregory, Michael J. Allen, Matthew B. Sullivan, Ben Temperton
Published 2019-04-01

Numerous cultivated and uncultivated viruses encode ribosomal proteins

by Carolina M. Mizuno, Charlotte Guyomar, Simon Roux, Régis Lavigne, Francisco Rodriguez-Valera, Matthew B. Sullivan, Reynald Gillet, Patrick Forterre, Mart Krupovic
Published 2019-02-01