2D-Qsar for 450 types of amino acid induction peptides with a novel substructure pair descriptor having wider scope

by Osoda Tsutomu, Miyano Satoru
Published 2011-11-01

An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location information

by Miyano Satoru, Nagasaki Masao, Kojima Kaname
Published 2010-06-01

Exploring temporal transcription regulation structure of <it>Aspergillus fumigatus </it>in heat shock by state space model

by Miyano Satoru, Yamaguchi Rui, Do Jin Hwan
Published 2009-07-01

Ontology-based instance data validation for high-quality curated biological pathways

by Ueno Kazuko, Nagasaki Masao, Jeong Euna, Miyano Satoru
Published 2011-02-01

ChopSticks: High-resolution analysis of homozygous deletions by exploiting concordant read pairs

by Yasuda Tomohiro, Suzuki Shin, Nagasaki Masao, Miyano Satoru
Published 2012-10-01

BFL: a node and edge betweenness based fast layout algorithm for large scale networks

by Kojima Kaname, Nagasaki Masao, Hashimoto Tatsunori B, Miyano Satoru
Published 2009-01-01

ClipCrop: a tool for detecting structural variations with single-base resolution using soft-clipping information

by Suzuki Shin, Yasuda Tomohiro, Shiraishi Yuichi, Miyano Satoru, Nagasaki Masao
Published 2011-12-01

An efficient grid layout algorithm for biological networks utilizing various biological attributes

by Kato Mitsuru, Jeong Euna, Nagasaki Masao, Kojima Kaname, Miyano Satoru
Published 2007-03-01

The impact of measurement errors in the identification of regulatory networks

by Sato João R, Patriota Alexandre G, Fujita André, Miyano Satoru
Published 2009-12-01

Simulated Cell Division Processes of the Xenopus Cell Cycle Pathway by Genomic Object Net

by Matsui Mika, Fujita Sachie, Suzuki Shunichi, Matsuno Hiroshi, Miyano Satoru
Published 2004-12-01

ExonMiner: Web service for analysis of GeneChip Exon array data

by Imoto Seiya, Saito Ayumu, Nagasaki Masao, Yoshida Ryo, Numata Kazuyuki, Miyano Satoru
Published 2008-11-01

Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing

by Kojima Kaname, Imoto Seiya, Yamaguchi Rui, Fujita André, Yamauchi Mai, Gotoh Noriko, Miyano Satoru
Published 2012-01-01

AYUMS: an algorithm for completely automatic quantitation based on LC-MS/MS proteome data and its application to the analysis of signal transduction

by Sugano Sumio, Semba Kentaro, Kozuka-Hata Hiroko, Oyama Masaaki, Nagasaki Masao, Saito Ayumu, Yamamoto Tadashi, Miyano Satoru
Published 2007-01-01

A microarray analysis of gnotobiotic mice indicating that microbial exposure during the neonatal period plays an essential role in immune system development

by Yamamoto Masahiro, Yamaguchi Rui, Munakata Kaori, Takashima Kiyoe, Nishiyama Mitsue, Hioki Kyoji, Ohnishi Yasuyuki, Nagasaki Masao, Imoto Seiya, Miyano Satoru, Ishige Atsushi, Watanabe Kenji
Published 2012-07-01

Vasohibin-1 is identified as a master-regulator of endothelial cell apoptosis using gene network analysis

by Affara Muna, Sanders Debbie, Araki Hiromitsu, Tamada Yoshinori, Dunmore Benjamin J, Humphreys Sally, Imoto Seiya, Savoie Christopher, Miyano Satoru, Kuhara Satoru, Jeffries David, Print Cristin, Charnock-Jones D Stephen
Published 2013-01-01