A format for phylogenetic placements.

by Frederick A Matsen, Noah G Hoffman, Aaron Gallagher, Alexandros Stamatakis
Published 2012-01-01

Evaluating the accuracy of amplicon-based microbiome computational pipelines on simulated human gut microbial communities

by Jonathan L. Golob, Elisa Margolis, Noah G. Hoffman, David N. Fredricks
Published 2017-05-01

Complementing 16S rRNA Gene Amplicon Sequencing with Total Bacterial Load To Infer Absolute Species Concentrations in the Vaginal Microbiome

by Florencia A. Tettamanti Boshier, Sujatha Srinivasan, Anthony Lopez, Noah G. Hoffman, Sean Proll, David N. Fredricks, Joshua T. Schiffer
Published 2020-04-01

More than meets the eye: associations of vaginal bacteria with gram stain morphotypes using molecular phylogenetic analysis.

by Sujatha Srinivasan, Martin T Morgan, Congzhou Liu, Frederick A Matsen, Noah G Hoffman, Tina L Fiedler, Kathy J Agnew, Jeanne M Marrazzo, David N Fredricks
Published 2013-01-01

Bacterial communities in women with bacterial vaginosis: high resolution phylogenetic analyses reveal relationships of microbiota to clinical criteria.

by Sujatha Srinivasan, Noah G Hoffman, Martin T Morgan, Frederick A Matsen, Tina L Fiedler, Robert W Hall, Frederick J Ross, Connor O McCoy, Roger Bumgarner, Jeanne M Marrazzo, David N Fredricks
Published 2012-01-01

Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections.

by Stephen J Salipante, Dhruba J Sengupta, Christopher Rosenthal, Gina Costa, Jessica Spangler, Elizabeth H Sims, Michael A Jacobs, Samuel I Miller, Daniel R Hoogestraat, Brad T Cookson, Connor McCoy, Frederick A Matsen, Jay Shendure, Clarence C Lee, Timothy T Harkins, Noah G Hoffman
Published 2013-01-01