Cellular population dynamics control the robustness of the stem cell niche

by Adam L. MacLean, Paul D. W. Kirk, Michael P. H. Stumpf
Published 2015-11-01

A Bayesian semi-parametric model for thermal proteome profiling

by Siqi Fang, Paul D. W. Kirk, Marcus Bantscheff, Kathryn S. Lilley, Oliver M. Crook
Published 2021-06-01

A Bayesian mixture modelling approach for spatial proteomics.

by Oliver M Crook, Claire M Mulvey, Paul D W Kirk, Kathryn S Lilley, Laurent Gatto
Published 2018-11-01

A Bioconductor workflow for the Bayesian analysis of spatial proteomics [version 1; peer review: 1 approved, 2 approved with reservations]

by Oliver M. Crook, Lisa M. Breckels, Kathryn S. Lilley, Paul D.W. Kirk, Laurent Gatto
Published 2019-04-01

Model selection in systems biology depends on experimental design.

by Daniel Silk, Paul D W Kirk, Chris P Barnes, Tina Toni, Michael P H Stumpf
Published 2014-06-01

Accelerating Bayesian hierarchical clustering of time series data with a randomised algorithm.

by Robert Darkins, Emma J Cooke, Zoubin Ghahramani, Paul D W Kirk, David L Wild, Richard S Savage
Published 2013-01-01

A semi-supervised Bayesian approach for simultaneous protein sub-cellular localisation assignment and novelty detection.

by Oliver M Crook, Aikaterini Geladaki, Daniel J H Nightingale, Owen L Vennard, Kathryn S Lilley, Laurent Gatto, Paul D W Kirk
Published 2020-11-01

A fast and efficient colocalization algorithm for identifying shared genetic risk factors across multiple traits

by Christopher N. Foley, James R. Staley, Philip G. Breen, Benjamin B. Sun, Paul D. W. Kirk, Stephen Burgess, Joanna M. M. Howson
Published 2021-02-01

Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling

by Sarah Filippi, Chris P. Barnes, Paul D.W. Kirk, Takamasa Kudo, Katsuyuki Kunida, Siobhan S. McMahon, Takaho Tsuchiya, Takumi Wada, Shinya Kuroda, Michael P.H. Stumpf
Published 2016-06-01

The RNA landscape of the human placenta in health and disease

by Sungsam Gong, Francesca Gaccioli, Justyna Dopierala, Ulla Sovio, Emma Cook, Pieter-Jan Volders, Lennart Martens, Paul D. W. Kirk, Sylvia Richardson, Gordon C. S. Smith, D. Stephen Charnock-Jones
Published 2021-05-01

A Comprehensive Evaluation of Nasal and Bronchial Cytokines and Chemokines Following Experimental Rhinovirus Infection in Allergic Asthma: Increased Interferons (IFN-γ and IFN-λ) a...

by Trevor T. Hansel, Tanushree Tunstall, Maria-Belen Trujillo-Torralbo, Betty Shamji, Ajerico del-Rosario, Jaideep Dhariwal, Paul D.W. Kirk, Michael P.H. Stumpf, Jens Koopmann, Aurica Telcian, Julia Aniscenko, Leila Gogsadze, Eteri Bakhsoliani, Luminita Stanciu, Nathan Bartlett, Michael Edwards, Ross Walton, Patrick Mallia, Toby M. Hunt, Trevor L. Hunt, Duncan G. Hunt, John Westwick, Matthew Edwards, Onn Min Kon, David J. Jackson, Sebastian L. Johnston
Published 2017-05-01