Genome-wide DNA methylation analysis of systemic lupus erythematosus reveals persistent hypomethylation of interferon genes and compositional changes to CD4+ T-cell populations.

by Devin M Absher, Xinrui Li, Lindsay L Waite, Andrew Gibson, Kevin Roberts, Jeffrey Edberg, W Winn Chatham, Robert P Kimberly
Published 2013-01-01

Human FasL gene is a target of β-catenin/T-cell factor pathway and complex FasL haplotypes alter promoter functions.

by Jianming Wu, Maureen H Richards, Jinhai Huang, Lena Al-Harthi, Xiulong Xu, Rui Lin, Fenglong Xie, Andrew W Gibson, Jeffrey C Edberg, Robert P Kimberly
Published 2011-01-01

Genomic copy number variants: evidence for association with antibody response to anthrax vaccine adsorbed.

by Michael I Falola, Howard W Wiener, Nathan E Wineinger, Gary R Cutter, Robert P Kimberly, Jeffrey C Edberg, Donna K Arnett, Richard A Kaslow, Jianming Tang, Sadeep Shrestha
Published 2013-01-01

Time to renal disease and end-stage renal disease in PROFILE: a multiethnic lupus cohort.

by Graciela S Alarcón, Gerald McGwin, Michelle Petri, Rosalind Ramsey-Goldman, Barri J Fessler, Luis M Vilá, Jeffrey C Edberg, John D Reveille, Robert P Kimberly, PROFILE Study Group
Published 2006-10-01

Regional admixture mapping and structured association testing: conceptual unification and an extensible general linear model.

by David T Redden, Jasmin Divers, Laura Kelly Vaughan, Hemant K Tiwari, T Mark Beasley, José R Fernández, Robert P Kimberly, Rui Feng, Miguel A Padilla, Nianjun Liu, Michael B Miller, David B Allison
Published 2006-08-01

Estimation of cell-type composition including T and B cell subtypes for whole blood methylation microarray data

by Lindsay L Waite, Lindsay L Waite, Benjamin eWeaver, Kenneth eDay, Xinrui eLi, Kevin eRoberts, Andrew W Gibson, Jeffrey C Edberg, Robert P Kimberly, Devin M Absher, Hemant K Tiwari
Published 2016-02-01

Common variants within MECP2 confer risk of systemic lupus erythematosus.

by Amr H Sawalha, Ryan Webb, Shizhong Han, Jennifer A Kelly, Kenneth M Kaufman, Robert P Kimberly, Marta E Alarcón-Riquelme, Judith A James, Timothy J Vyse, Gary S Gilkeson, Chan-Bum Choi, R Hal Scofield, Sang-Cheol Bae, Swapan K Nath, John B Harley
Published 2008-03-01

Correction: Genome-Wide Association Study of African and European Americans Implicates Multiple Shared and Ethnic Specific Loci in Sarcoidosis Susceptibility

by Indra Adrianto, Chee Paul Lin, Jessica J. Hale, Albert M. Levin, Indrani Datta, Ryan Parker, Adam Adler, Jennifer A. Kelly, Kenneth M. Kaufman, Christopher J. Lessard, Kathy L. Moser, Robert P. Kimberly, John B. Harley, Michael C. Iannuzzi, Benjamin A. Rybicki, Courtney G. Montgomery
Published 2013-01-01

Correction: Genome-Wide Association Study of African and European Americans Implicates Multiple Shared and Ethnic Specific Loci in Sarcoidosis Susceptibility.

by Indra Adrianto, Chee Paul Lin, Jessica J. Hale, Albert M. Levin, Indrani Datta, Ryan Parker, Adam Adler, Jennifer A. Kelly, Kenneth M. Kaufman, Christopher J. Lessard, Kathy L. Moser, Robert P. Kimberly, John B. Harley, Michael C. Iannuzzi, Benjamin A. Rybicki, Courtney G. Montgomery
Published 2013-01-01

Genome-wide association study of African and European Americans implicates multiple shared and ethnic specific loci in sarcoidosis susceptibility.

by Indra Adrianto, Chee Paul Lin, Jessica J Hale, Albert M Levin, Indrani Datta, Ryan Parker, Adam Adler, Jennifer A Kelly, Kenneth M Kaufman, Christopher J Lessard, Kathy L Moser, Robert P Kimberly, John B Harley, Michael C Iannuzzi, Benjamin A Rybicki, Courtney G Montgomery
Published 2012-01-01

IFNγ induces epigenetic programming of human T-bethi B cells and promotes TLR7/8 and IL-21 induced differentiation

by Esther Zumaquero, Sara L Stone, Christopher D Scharer, Scott A Jenks, Anoma Nellore, Betty Mousseau, Antonio Rosal-Vela, Davide Botta, John E Bradley, Wojciech Wojciechowski, Travis Ptacek, Maria I Danila, Jeffrey C Edberg, S Louis Bridges Jr, Robert P Kimberly, W Winn Chatham, Trenton R Schoeb, Alexander F Rosenberg, Jeremy M Boss, Ignacio Sanz, Frances E Lund
Published 2019-05-01

An African ancestry-specific allele of CTLA4 confers protection against rheumatoid arthritis in African Americans.

by James M Kelley, Laura B Hughes, Jeffrey D Faggard, Maria I Danila, Monica H Crawford, Yuanqing Edberg, Miguel A Padilla, Hemant K Tiwari, Andrew O Westfall, Graciela S Alarcón, Doyt L Conn, Beth L Jonas, Leigh F Callahan, Edwin A Smith, Richard D Brasington, David B Allison, Robert P Kimberly, Larry W Moreland, Jeffrey C Edberg, S Louis Bridges
Published 2009-03-01

Retraction: an African ancestry-specific allele of CTLA4 confers protection against rheumatoid arthritis in African Americans.

by James M Kelley, Laura B Hughes, Jeffrey D Faggard, Maria I Danila, Monica H Crawford, Yuanqing Edberg, Miguel A Padilla, Hemant K Tiwari, Andrew O Westfall, Graciela S Alarcón, Doyt L Conn, Beth L Jonas, Leigh F Callahan, Edwin A Smith, Richard D Brasington, David B Allison, Robert P Kimberly, Larry W Moreland, Jeffrey C Edberg, S Louis Bridges
Published 2009-12-01

A comprehensive analysis of shared loci between systemic lupus erythematosus (SLE) and sixteen autoimmune diseases reveals limited genetic overlap.

by Paula S Ramos, Lindsey A Criswell, Kathy L Moser, Mary E Comeau, Adrienne H Williams, Nicholas M Pajewski, Sharon A Chung, Robert R Graham, Raphael Zidovetzki, Jennifer A Kelly, Kenneth M Kaufman, Chaim O Jacob, Timothy J Vyse, Betty P Tsao, Robert P Kimberly, Patrick M Gaffney, Marta E Alarcón-Riquelme, John B Harley, Carl D Langefeld, International Consortium on the Genetics of Systemic Erythematosus
Published 2011-12-01

Individualized decision aid for diverse women with lupus nephritis (IDEA-WON): A randomized controlled trial.

by Jasvinder A Singh, Liana Fraenkel, Candace Green, Graciela S Alarcón, Jennifer L Barton, Kenneth G Saag, Leslie M Hanrahan, Sandra C Raymond, Robert P Kimberly, Amye L Leong, Elyse Reyes, Richard L Street, Maria E Suarez-Almazor, Guy S Eakin, Laura Marrow, Charity J Morgan, Brennda Caro, Jeffrey A Sloan, Bochra Jandali, Salvador R Garcia, Jennifer Grossman, Kevin L Winthrop, Laura Trupin, Maria Dall'Era, Alexa Meara, Tara Rizvi, W Winn Chatham, Jinoos Yazdany
Published 2019-05-01

The Role of Genetic Variation Near Interferon-Kappa in Systemic Lupus Erythematosus

by Isaac T. W. Harley, Timothy B. Niewold, Rebecca M. Stormont, Kenneth M. Kaufman, Stuart B. Glenn, Beverly S. Franek, Jennifer A. Kelly, Jeffrey R. Kilpatrick, David Hutchings, Jasmin Divers, Gail R. Bruner, Jeffrey C. Edberg, Gerald McGwin, Michelle A. Petri, Rosalind Ramsey-Goldman, John D. Reveille, Luis M. Vilá-Pérez, Joan T. Merrill, Gary S. Gilkeson, Timothy J. Vyse, Marta E. Alarcón-Riquelme, Soo-Kyung Cho, Chaim O. Jacob, Graciela S. Alarcón, Kathy L. Moser, Patrick M. Gaffney, Robert P. Kimberly, Sang-Cheol Bae, Carl D. Langefeld, John B. Harley, Joel M. Guthridge, Judith A. James
Published 2010-01-01

Admixture mapping in lupus identifies multiple functional variants within IFIH1 associated with apoptosis, inflammation, and autoantibody production.

by Julio E Molineros, Amit K Maiti, Celi Sun, Loren L Looger, Shizhong Han, Xana Kim-Howard, Stuart Glenn, Adam Adler, Jennifer A Kelly, Timothy B Niewold, Gary S Gilkeson, Elizabeth E Brown, Graciela S Alarcón, Jeffrey C Edberg, Michelle Petri, Rosalind Ramsey-Goldman, John D Reveille, Luis M Vilá, Barry I Freedman, Betty P Tsao, Lindsey A Criswell, Chaim O Jacob, Jason H Moore, Timothy J Vyse, Carl L Langefeld, Joel M Guthridge, Patrick M Gaffney, Kathy L Moser, R Hal Scofield, Marta E Alarcón-Riquelme, BIOLUPUS Network, Scott M Williams, Joan T Merrill, Judith A James, Kenneth M Kaufman, Robert P Kimberly, John B Harley, Swapan K Nath
Published 2013-01-01

Trans-ancestral studies fine map the SLE-susceptibility locus TNFSF4.

by Harinder Manku, Carl D Langefeld, Sandra G Guerra, Talat H Malik, Marta Alarcon-Riquelme, Juan-Manuel Anaya, Sang-Cheol Bae, Susan A Boackle, Elizabeth E Brown, Lindsey A Criswell, Barry I Freedman, Patrick M Gaffney, Peter A Gregersen, Joel M Guthridge, Sang-Hoon Han, John B Harley, Chaim O Jacob, Judith A James, Diane L Kamen, Kenneth M Kaufman, Jennifer A Kelly, Javier Martin, Joan T Merrill, Kathy L Moser, Timothy B Niewold, So-Yeon Park, Bernardo A Pons-Estel, Amr H Sawalha, R Hal Scofield, Nan Shen, Anne M Stevens, Celi Sun, Gary S Gilkeson, Jeff C Edberg, Robert P Kimberly, Swapan K Nath, Betty P Tsao, Tim J Vyse
Published 2013-01-01

MicroRNA-3148 modulates allelic expression of toll-like receptor 7 variant associated with systemic lupus erythematosus.

by Yun Deng, Jian Zhao, Daisuke Sakurai, Kenneth M Kaufman, Jeffrey C Edberg, Robert P Kimberly, Diane L Kamen, Gary S Gilkeson, Chaim O Jacob, R Hal Scofield, Carl D Langefeld, Jennifer A Kelly, Rosalind Ramsey-Goldman, Michelle A Petri, John D Reveille, Luis M Vilá, Graciela S Alarcón, Timothy J Vyse, Bernardo A Pons-Estel, Argentine Collaborative Group, Barry I Freedman, Patrick M Gaffney, Kathy Moser Sivils, Judith A James, Peter K Gregersen, Juan-Manuel Anaya, Timothy B Niewold, Joan T Merrill, Lindsey A Criswell, Anne M Stevens, Susan A Boackle, Rita M Cantor, Weiling Chen, Jeniffer M Grossman, Bevra H Hahn, John B Harley, Marta E Alarcόn-Riquelme, BIOLUPUS and GENLES networks, Elizabeth E Brown, Betty P Tsao
Published 2013-01-01

PTPN22 association in systemic lupus erythematosus (SLE) with respect to individual ancestry and clinical sub-phenotypes.

by Bahram Namjou, Xana Kim-Howard, Celi Sun, Adam Adler, Sharon A Chung, Kenneth M Kaufman, Jennifer A Kelly, Stuart B Glenn, Joel M Guthridge, Robert H Scofield, Robert P Kimberly, Elizabeth E Brown, Graciela S Alarcón, Jeffrey C Edberg, Jae-Hoon Kim, Jiyoung Choi, Rosalind Ramsey-Goldman, Michelle A Petri, John D Reveille, Luis M Vilá, Susan A Boackle, Barry I Freedman, Betty P Tsao, Carl D Langefeld, Timothy J Vyse, Chaim O Jacob, Bernardo Pons-Estel, Argentine Collaborative Group, Timothy B Niewold, Kathy L Moser Sivils, Joan T Merrill, Juan-Manuel Anaya, Gary S Gilkeson, Patrick M Gaffney, Sang-Cheol Bae, Marta E Alarcón-Riquelme, BIOLUPUS and GENLES Networks, John B Harley, Lindsey A Criswell, Judith A James, Swapan K Nath
Published 2013-01-01