Negative Selection by Spiral Inertial Microfluidics Improves Viral Recovery and Sequencing from Blood

by Choi, Kyungyong, Ryu, Hyunryul, Siddle, Katherine J., Piantadosi, Anne, Freimark, Lisa, Park, Daniel J., Sabeti, Pardis, Han, Jongyoon
Published 2019

Widespread Shortening of 3' Untranslated Regions and Increased Exon Inclusion Are Evolutionarily Conserved Features of Innate Immune Responses to Infection

by Baharian, Golshid, Pagé Sabourin, Ariane, Brinkworth, Jessica F., Nédélec, Yohann, Foley, Joseph W., Grenier, Jean-Christophe, Siddle, Katherine J., Dumaine, Anne, Yotova, Vania, Johnson, Zachary P., Lanford, Robert E., Barreiro, Luis B., Pai, Athma A., Burge, Christopher B
Published 2018

Capturing sequence diversity in metagenomes with comprehensive and scalable probe design

by Metsky, Hayden C., Siddle, Katherine J., Gladden-Young, Adrianne, Qu, James, Yang, David K., Brehio, Patrick, Goldfarb, Andrew, Piantadosi, Anne, Wohl, Shirley, Carter, Amber, Lin, Aaron E., Barnes, Kayla G., Tully, Damien C., Corleis, Bjӧrn, Hennigan, Scott, Barbosa-Lima, Giselle, Vieira, Yasmine R., Paul, Lauren M., Tan, Amanda L., Garcia, Kimberly F., Parham, Leda A., Odia, Ikponmwosa, Eromon, Philomena, Folarin, Onikepe A., Goba, Augustine, Simon, Simon-Lorière, Etienne, Hensley, Lisa, Balmaseda, Angel, Harris, Eva, Kwon, Douglas, Allen, Todd M., Runstadler, Jonathan A., Smole, Sandra, Bozza, Fernando A., Souza, Thiago M. L., Isern, Sharon, Michael, Scott F., Lorenzana, Ivette, Gehrke, Lee, Bosch, Irene, Ebel, Gregory, Grant, Donald S., Happi, Christian T., Park, Daniel J., Gnirke, Andreas, Sabeti, Pardis C., Matranga, Christian B.
Published 2021