An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach

by Arun Kumar Jaiswal, Sandeep Tiwari, Syed Babar Jamal, Debmalya Barh, Vasco Azevedo, Siomar C. Soares
Published 2017-02-01

An insight into the salivary gland and fat body transcriptome of Panstrongylus lignarius (Hemiptera: Heteroptera), the main vector of Chagas disease in Peru.

by Jessica C Nevoa, Maria T Mendes, Marcos V da Silva, Siomar C Soares, Carlo J F Oliveira, José M C Ribeiro
Published 2018-02-01

The pan-genome of Treponema pallidum reveals differences in genome plasticity between subspecies related to venereal and non-venereal syphilis

by Arun Kumar Jaiswal, Sandeep Tiwari, Syed Babar Jamal, Letícia de Castro Oliveira, Leandro Gomes Alves, Vasco Azevedo, Preetam Ghosh, Carlo Jose Freira Oliveira, Siomar C. Soares
Published 2020-01-01

Label-free quantitative proteomics of Corynebacterium pseudotuberculosis isolates reveals differences between Biovars ovis and equi strains

by Wanderson M. Silva, Edson L. Folador, Siomar C. Soares, Gustavo H. M. F. Souza, Agenor V. Santos, Cassiana S. Sousa, Henrique Figueiredo, Anderson Miyoshi, Yves Le Loir, Artur Silva, Vasco Azevedo
Published 2017-06-01

PIPS: pathogenicity island prediction software.

by Siomar C Soares, Vinícius A C Abreu, Rommel T J Ramos, Louise Cerdeira, Artur Silva, Jan Baumbach, Eva Trost, Andreas Tauch, Raphael Hirata, Ana L Mattos-Guaraldi, Anderson Miyoshi, Vasco Azevedo
Published 2012-01-01

Analyses of the probiotic property and stress resistance-related genes of Lactococcus lactis subsp. lactis NCDO 2118 through comparative genomics and in vitro assays.

by Letícia C Oliveira, Tessália D L Saraiva, Wanderson M Silva, Ulisses P Pereira, Bruno C Campos, Leandro J Benevides, Flávia S Rocha, Henrique C P Figueiredo, Vasco Azevedo, Siomar C Soares
Published 2017-01-01

Pan-Genome Analysis of Human Gastric Pathogen H. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Poten...

by Amjad Ali, Anam Naz, Siomar C Soares, Marriam Bakhtiar, Sandeep Tiwari, Syed S Hassan, Fazal Hanan, Rommel Ramos, Ulisses Pereira, Debmalya Barh, Henrique César Pereira Figueiredo, David W. Ussery, Anderson Miyoshi, Artur Silva, Vasco Azevedo
Published 2015-01-01

Corynebacterium pseudotuberculosis RNA-seq data from abiotic stresses

by Pablo H.C.G. de Sá, Adonney A.O. Veras, Adriana R. Carneiro, Rafael A. Baraúna, Luís C. Guimarães, Kenny C. Pinheiro, Anne C. Pinto, Siomar C. Soares, Maria P.C. Schneider, Vasco Azevedo, Artur Silva, Rommel T.J. Ramos
Published 2015-12-01

The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains.

by Siomar C Soares, Artur Silva, Eva Trost, Jochen Blom, Rommel Ramos, Adriana Carneiro, Amjad Ali, Anderson R Santos, Anne C Pinto, Carlos Diniz, Eudes G V Barbosa, Fernanda A Dorella, Flávia Aburjaile, Flávia S Rocha, Karina K F Nascimento, Luís C Guimarães, Sintia Almeida, Syed S Hassan, Syeda M Bakhtiar, Ulisses P Pereira, Vinicius A C Abreu, Maria P C Schneider, Anderson Miyoshi, Andreas Tauch, Vasco Azevedo
Published 2013-01-01

Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locu...

by Rodrigo Profeta, Núbia Seyffert, Sandeep Tiwari, Marcus V.C. Viana, Arun Kumar Jaiswal, Ana Carolina Caetano, Daniel Henrique Bücker, Luciana Tavares de Oliveira, Roselane Santos, Alfonso Gala-Garcia, Rodrigo B. Kato, Francine F. Padilha, Isabel B. Lima-Verde, Preetam Ghosh, Debmalya Barh, Aristóteles Góes-Neto, Henrique C.P. Figueiredo, Siomar C. Soares, Roberto Meyer, Bertram Brenig, Pablo I.P. Ramos, Vasco Azevedo, Thiago L.P. Castro
Published 2021-02-01

Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains.

by Jerônimo C Ruiz, Vívian D'Afonseca, Artur Silva, Amjad Ali, Anne C Pinto, Anderson R Santos, Aryanne A M C Rocha, Débora O Lopes, Fernanda A Dorella, Luis G C Pacheco, Marcília P Costa, Meritxell Z Turk, Núbia Seyffert, Pablo M R O Moraes, Siomar C Soares, Sintia S Almeida, Thiago L P Castro, Vinicius A C Abreu, Eva Trost, Jan Baumbach, Andreas Tauch, Maria Paula C Schneider, John McCulloch, Louise T Cerdeira, Rommel T J Ramos, Adhemar Zerlotini, Anderson Dominitini, Daniela M Resende, Elisângela M Coser, Luciana M Oliveira, André L Pedrosa, Carlos U Vieira, Cláudia T Guimarães, Daniela C Bartholomeu, Diana M Oliveira, Fabrício R Santos, Élida Mara Rabelo, Francisco P Lobo, Glória R Franco, Ana Flávia Costa, Ieso M Castro, Sílvia Regina Costa Dias, Jesus A Ferro, José Miguel Ortega, Luciano V Paiva, Luiz R Goulart, Juliana Franco Almeida, Maria Inês T Ferro, Newton P Carneiro, Paula R K Falcão, Priscila Grynberg, Santuza M R Teixeira, Sérgio Brommonschenkel, Sérgio C Oliveira, Roberto Meyer, Robert J Moore, Anderson Miyoshi, Guilherme C Oliveira, Vasco Azevedo
Published 2011-04-01