Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing

by Suhua Feng, Zhenhui Zhong, Ming Wang, Steven E. Jacobsen
Published 2020-10-01

Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems

by Ashot Papikian, Wanlu Liu, Javier Gallego-Bartolomé, Steven E. Jacobsen
Published 2019-02-01

Promoter and Terminator Optimization for DNA Methylation Targeting in <i>Arabidopsis</i>

by Jason Gardiner, Jenny M. Zhao, Kendall Chaffin, Steven E. Jacobsen
Published 2020-06-01

SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV.

by Julie A Law, Ajay A Vashisht, James A Wohlschlegel, Steven E Jacobsen
Published 2011-07-01

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana.

by Yana V Bernatavichute, Xiaoyu Zhang, Shawn Cokus, Matteo Pellegrini, Steven E Jacobsen
Published 2008-09-01

Two-step recruitment of RNA-directed DNA methylation to tandem repeats.

by Simon W-L Chan, Xiaoyu Zhang, Yana V Bernatavichute, Steven E Jacobsen
Published 2006-11-01

SRA-domain proteins required for DRM2-mediated de novo DNA methylation.

by Lianna M Johnson, Julie A Law, Anuj Khattar, Ian R Henderson, Steven E Jacobsen
Published 2008-11-01

A viral guide RNA delivery system for CRISPR-based transcriptional activation and heritable targeted DNA demethylation in Arabidopsis thaliana.

by Basudev Ghoshal, Brandon Vong, Colette L Picard, Suhua Feng, Janet M Tam, Steven E Jacobsen
Published 2020-12-01

Dynamic regulation of ARGONAUTE4 within multiple nuclear bodies in Arabidopsis thaliana.

by Carey F Li, Ian R Henderson, Liang Song, Nina Fedoroff, Thierry Lagrange, Steven E Jacobsen
Published 2008-02-01

Loss of the DNA methyltransferase MET1 Induces H3K9 hypermethylation at PcG target genes and redistribution of H3K27 trimethylation to transposons in Arabidopsis thaliana.

by Angelique Deleris, Hume Stroud, Yana Bernatavichute, Elizabeth Johnson, Gregor Klein, Daniel Schubert, Steven E Jacobsen
Published 2012-01-01

Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis.

by Xiaoyu Zhang, Oliver Clarenz, Shawn Cokus, Yana V Bernatavichute, Matteo Pellegrini, Justin Goodrich, Steven E Jacobsen
Published 2007-05-01

Interplay between active chromatin marks and RNA-directed DNA methylation in Arabidopsis thaliana.

by Maxim V C Greenberg, Angelique Deleris, Christopher J Hale, Ao Liu, Suhua Feng, Steven E Jacobsen
Published 2013-11-01

DNA methyltransferases are required to induce heterochromatic re-replication in Arabidopsis.

by Hume Stroud, Christopher J Hale, Suhua Feng, Elena Caro, Yannick Jacob, Scott D Michaels, Steven E Jacobsen
Published 2012-07-01

RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis.

by Simon W-L Chan, Ian R Henderson, Xiaoyu Zhang, Govind Shah, Jason S-C Chien, Steven E Jacobsen
Published 2006-06-01

A kinesin Klp10A mediates cell cycle-dependent shuttling of Piwi between nucleus and nuage.

by Zsolt G Venkei, Charlotte P Choi, Suhua Feng, Cuie Chen, Steven E Jacobsen, John K Kim, Yukiko M Yamashita
Published 2020-03-01

Identification of Multiple Proteins Coupling Transcriptional Gene Silencing to Genome Stability in Arabidopsis thaliana.

by Christopher J Hale, Magdalena E Potok, Jennifer Lopez, Truman Do, Ao Liu, Javier Gallego-Bartolome, Scott D Michaels, Steven E Jacobsen
Published 2016-06-01

Genetic and functional diversification of small RNA pathways in plants.

by Zhixin Xie, Lisa K Johansen, Adam M Gustafson, Kristin D Kasschau, Andrew D Lellis, Daniel Zilberman, Steven E Jacobsen, James C Carrington
Published 2004-05-01

Plants regenerated from tissue culture contain stable epigenome changes in rice

by Hume Stroud, Bo Ding, Stacey A Simon, Suhua Feng, Maria Bellizzi, Matteo Pellegrini, Guo-Liang Wang, Blake C Meyers, Steven E Jacobsen
Published 2013-03-01

Increasing Nucleosome Occupancy Is Correlated with an Increasing Mutation Rate so Long as DNA Repair Machinery Is Intact.

by Puya G Yazdi, Brian A Pedersen, Jared F Taylor, Omar S Khattab, Yu-Han Chen, Yumay Chen, Steven E Jacobsen, Ping H Wang
Published 2015-01-01

Nucleosome Organization in Human Embryonic Stem Cells.

by Puya G Yazdi, Brian A Pedersen, Jared F Taylor, Omar S Khattab, Yu-Han Chen, Yumay Chen, Steven E Jacobsen, Ping H Wang
Published 2015-01-01