High-quality ChIP-seq analysis of MBD3 in human breast cancer cells

by Takashi Shimbo, Motoki Takaku, Paul A. Wade
Published 2016-03-01

Cut-C: cleavage under tethered nuclease for conformational capture

by Takashi Shimbo, Machika Kawamura, Edward Wijaya, Eiichi Takaki, Yasufumi Kaneda, Katsuto Tamai
Published 2019-07-01

Serum anti-BPAG1 auto-antibody is a novel marker for human melanoma.

by Takashi Shimbo, Atsushi Tanemura, Takehiko Yamazaki, Katsuto Tamai, Ichiro Katayama, Yasufumi Kaneda
Published 2010-05-01

MBD3 localizes at promoters, gene bodies and enhancers of active genes.

by Takashi Shimbo, Ying Du, Sara A Grimm, Archana Dhasarathy, Deepak Mav, Ruchir R Shah, Huidong Shi, Paul A Wade
Published 2013-01-01

Longitudinal Single-Cell Transcriptomics Reveals a Role for Serpina3n-Mediated Resolution of Inflammation in a Mouse Colitis ModelSummary

by Yen-Ting Ho, Takashi Shimbo, Edward Wijaya, Tomomi Kitayama, Satoshi Takaki, Kentaro Ikegami, Kazuya Miyashita, Yuya Ouchi, Eiichi Takaki, Ryoma Yamamoto, Yasufumi Kaneda, Katsuto Tamai
Published 2021-01-01

Genome-wide binding of MBD2 reveals strong preference for highly methylated loci.

by Roberta Menafra, Arie B Brinkman, Filomena Matarese, Gianluigi Franci, Stefanie J J Bartels, Luan Nguyen, Takashi Shimbo, Paul A Wade, Nina C Hubner, Hendrik G Stunnenberg
Published 2014-01-01

Synthesized HMGB1 peptide attenuates liver inflammation and suppresses fibrosis in mice

by Shunsuke Nojiri, Atsunori Tsuchiya, Kazuki Natsui, Suguru Takeuchi, Takayuki Watanabe, Yuichi Kojima, Yusuke Watanabe, Hiroteru Kamimura, Masahiro Ogawa, Satoko Motegi, Takahiro Iwasawa, Takeki Sato, Masaru Kumagai, Yui Ishii, Tomomi Kitayama, Yu-Tung Li, Yuya Ouchi, Takashi Shimbo, Masaaki Takamura, Katsuto Tamai, Shuji Terai
Published 2021-09-01

DNA methylation in mice is influenced by genetics as well as sex and life experience

by Sara A. Grimm, Takashi Shimbo, Motoki Takaku, James W. Thomas, Scott Auerbach, Brian D. Bennett, John R. Bucher, Adam B. Burkholder, Frank Day, Ying Du, Christopher G. Duncan, John E. French, Julie F. Foley, Jianying Li, B. Alex Merrick, Raymond R. Tice, Tianyuan Wang, Xiaojiang Xu, NISC Comparative Sequencing Program, Pierre R. Bushel, David C. Fargo, James C. Mullikin, Paul A. Wade
Published 2019-01-01