Metagenomic analysis of viral communities in (hado)pelagic sediments.

by Mitsuhiro Yoshida, Yoshihiro Takaki, Masamitsu Eitoku, Takuro Nunoura, Ken Takai
Published 2013-01-01

A single-molecule counting approach for convenient and ultrasensitive measurement of restriction digest efficiencies.

by Yi Zhang, Takuro Nunoura, Daisuke Nishiura, Miho Hirai, Shigeru Shimamura, Kanako Kurosawa, Chieko Ishiwata, Shigeru Deguchi
Published 2020-01-01

Genomic heterogeneity in a natural archaeal population suggests a model of tRNA gene disruption.

by Junichi Sugahara, Kosuke Fujishima, Takuro Nunoura, Yoshihiro Takaki, Hideto Takami, Ken Takai, Masaru Tomita, Akio Kanai
Published 2012-01-01

Physiological and genomic features of a novel sulfur-oxidizing gammaproteobacterium belonging to a previously uncultivated symbiotic lineage isolated from a hydrothermal vent.

by Takuro Nunoura, Yoshihiro Takaki, Hiromi Kazama, Jungo Kakuta, Shigeru Shimamura, Hiroko Makita, Miho Hirai, Masayuki Miyazaki, Ken Takai
Published 2014-01-01

Viral Infections Boost Prokaryotic Biomass Production and Organic C Cycling in Hadal Trench Sediments

by Elisabetta Manea, Antonio Dell’Anno, Eugenio Rastelli, Michael Tangherlini, Takuro Nunoura, Hidetaka Nomaki, Roberto Danovaro, Roberto Danovaro, Cinzia Corinaldesi
Published 2019-08-01

Drivers of Bacterial α- and β-Diversity Patterns and Functioning in Subsurface Hadal Sediments

by Eugenio Rastelli, Cinzia Corinaldesi, Antonio Dell’Anno, Michael Tangherlini, Marco Lo Martire, Manabu Nishizawa, Hidetaka Nomaki, Takuro Nunoura, Roberto Danovaro, Roberto Danovaro
Published 2019-11-01

Distribution and niche separation of planktonic microbial communities in the water columns from the surface to the hadal waters of the Japan Trench under the eutrophic ocean

by Takuro Nunoura, Miho Hirai, Yukari Yoshida-Takashima, Manabu Nishizawa, Shinsuke Kawagucci, Taichi Yokokawa, Junichi Miyazaki, Osamu Koide, Hiroko Makita, Yoshihiro Takaki, Michinari SUNAMURA, Ken Takai
Published 2016-08-01

Viral Communities in the Global Deep Ocean Conveyor Belt Assessed by Targeted Viromics

by Daniele De Corte, Joaquín Martínez Martínez, Mariana Silvia Cretoiu, Yoshihiro Takaki, Takuro Nunoura, Eva Sintes, Eva Sintes, Gerhard J. Herndl, Gerhard J. Herndl, Taichi Yokokawa
Published 2019-08-01

A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface ecosystem.

by Hideto Takami, Hideki Noguchi, Yoshihiro Takaki, Ikuo Uchiyama, Atsushi Toyoda, Shinro Nishi, Gab-Joo Chee, Wataru Arai, Takuro Nunoura, Takehiko Itoh, Masahira Hattori, Ken Takai
Published 2012-01-01

Quantitative Viral Community DNA Analysis Reveals the Dominance of Single-Stranded DNA Viruses in Offshore Upper Bathyal Sediment from Tohoku, Japan

by Mitsuhiro Yoshida, Tomohiro Mochizuki, Tomohiro Mochizuki, Syun-Ichi Urayama, Yukari Yoshida-Takashima, Shinro Nishi, Miho Hirai, Hidetaka Nomaki, Hidetaka Nomaki, Yoshihiro Takaki, Takuro Nunoura, Ken Takai
Published 2018-02-01

A long-term cultivation of an anaerobic methane-oxidizing microbial community from deep-sea methane-seep sediment using a continuous-flow bioreactor.

by Masataka Aoki, Masayuki Ehara, Yumi Saito, Hideyoshi Yoshioka, Masayuki Miyazaki, Yayoi Saito, Ai Miyashita, Shuji Kawakami, Takashi Yamaguchi, Akiyoshi Ohashi, Takuro Nunoura, Ken Takai, Hiroyuki Imachi
Published 2014-01-01

Diverged and Active Partitiviruses in Lichen

by Syun-ichi Urayama, Syun-ichi Urayama, Syun-ichi Urayama, Nobutaka Doi, Fumie Kondo, Yuto Chiba, Yoshihiro Takaki, Miho Hirai, Yasutaka Minegishi, Daisuke Hagiwara, Daisuke Hagiwara, Takuro Nunoura
Published 2020-10-01

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

by Jimmy H. W. Saw, Takuro Nunoura, Miho Hirai, Yoshihiro Takaki, Rachel Parsons, Michelle Michelsen, Krista Longnecker, Elizabeth B. Kujawinski, Ramunas Stepanauskas, Zachary Landry, Craig A. Carlson, Stephen J. Giovannoni
Published 2020-01-01

Hiding in Plain Sight: The Globally Distributed Bacterial Candidate Phylum PAUC34f

by Michael L. Chen, Michael L. Chen, Eric D. Becraft, Eric D. Becraft, Maria Pachiadaki, Maria Pachiadaki, Julia M. Brown, Jessica K. Jarett, Josep M. Gasol, Josep M. Gasol, Nikolai V. Ravin, Duane P. Moser, Takuro Nunoura, Gerhard J. Herndl, Gerhard J. Herndl, Tanja Woyke, Ramunas Stepanauskas
Published 2020-03-01