HandyCNV: Standardized Summary, Annotation, Comparison, and Visualization of Copy Number Variant, Copy Number Variation Region, and Runs of Homozygosity

by Jinghang Zhou, Jinghang Zhou, Liyuan Liu, Liyuan Liu, Thomas J. Lopdell, Dorian J. Garrick, Yuangang Shi
Published 2021-09-01

A new mechanism for a familiar mutation – bovine DGAT1 K232A modulates gene expression through multi-junction exon splice enhancement

by Tania Fink, Thomas J. Lopdell, Kathryn Tiplady, Renee Handley, Thomas J. J. Johnson, Richard J. Spelman, Stephen R. Davis, Russell G. Snell, Mathew D. Littlejohn
Published 2020-08-01

Multiple QTL underlie milk phenotypes at the CSF2RB locus

by Thomas J. Lopdell, Kathryn Tiplady, Christine Couldrey, Thomas J. J. Johnson, Michael Keehan, Stephen R. Davis, Bevin L. Harris, Richard J. Spelman, Russell G. Snell, Mathew D. Littlejohn
Published 2019-01-01

DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content

by Thomas J. Lopdell, Kathryn Tiplady, Maksim Struchalin, Thomas J. J. Johnson, Michael Keehan, Ric Sherlock, Christine Couldrey, Stephen R. Davis, Russell G. Snell, Richard J. Spelman, Mathew D. Littlejohn
Published 2017-12-01

Sequence-based genome-wide association study of individual milk mid-infrared wavenumbers in mixed-breed dairy cattle

by Kathryn M. Tiplady, Thomas J. Lopdell, Edwardo Reynolds, Richard G. Sherlock, Michael Keehan, Thomas JJ. Johnson, Jennie E. Pryce, Stephen R. Davis, Richard J. Spelman, Bevin L. Harris, Dorian J. Garrick, Mathew D. Littlejohn
Published 2021-07-01

Genome-wide association analysis reveals QTL and candidate mutations involved in white spotting in cattle

by Swati Jivanji, Gemma Worth, Thomas J. Lopdell, Anna Yeates, Christine Couldrey, Edwardo Reynolds, Kathryn Tiplady, Lorna McNaughton, Thomas J. J. Johnson, Stephen R. Davis, Bevin Harris, Richard Spelman, Russell G. Snell, Dorian Garrick, Mathew D. Littlejohn
Published 2019-11-01