A combination of extreme environmental conditions favor the prevalence of Endospore-forming Firmicutes

by Sevasti Filippidou, Tina Wunderlin, Thomas Junier, Thomas Junier, Nicole Jeanneret, Cristina Dorador, Veronica Molina, David Johnson, Pilar Junier
Published 2016-11-01

MLgsc: A Maximum-Likelihood General Sequence Classifier.

by Thomas Junier, Vincent Hervé, Tina Wunderlin, Pilar Junier
Published 2015-01-01

Under-detection of endospore-forming Firmicutes in metagenomic data

by Sevasti Filippidou, Thomas Junier, Tina Wunderlin, Chien-Chi Lo, Po-E Li, Patrick S. Chain, Pilar Junier
Published 2015-01-01

Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater

by Christophe Paul, Zhanna Bayrychenko, Thomas Junier, Sevasti Filippidou, Karin Beck, Matthieu Bueche, Gilbert Greub, Helmut Bürgmann, Pilar Junier
Published 2018-06-01

A historical legacy of antibiotic utilization on bacterial seed banks in sediments

by Laura Madueño, Christophe Paul, Thomas Junier, Zhanna Bayrychenko, Sevasti Filippidou, Karin Beck, Gilbert Greub, Helmut Bürgmann, Pilar Junier
Published 2018-01-01

Manganese-II oxidation and Copper-II resistance in endospore forming Firmicutes isolated from uncontaminated environmental sites

by Cristina Dorador, Ganesan Sathiyanarayanan, Sevasti Filippidou, Thomas Junier, Patricio Muñoz Rufatt, Nicole Jeanneret, Tina Wunderlin, Nathalie Sieber, Pilar Junier
Published 2016-04-01

Rhinovirus genome evolution during experimental human infection.

by Samuel Cordey, Thomas Junier, Daniel Gerlach, Francesca Gobbini, Laurent Farinelli, Evgeny M Zdobnov, Birgit Winther, Caroline Tapparel, Laurent Kaiser
Published 2010-01-01

Rhinovirus genome variation during chronic upper and lower respiratory tract infections.

by Caroline Tapparel, Samuel Cordey, Thomas Junier, Laurent Farinelli, Sandra Van Belle, Paola M Soccal, John-David Aubert, Evgeny Zdobnov, Laurent Kaiser
Published 2011-01-01

Virosaurus A Reference to Explore and Capture Virus Genetic Diversity

by Anne Gleizes, Florian Laubscher, Nicolas Guex, Christian Iseli, Thomas Junier, Samuel Cordey, Jacques Fellay, Ioannis Xenarios, Laurent Kaiser, Philippe Le Mercier
Published 2020-11-01

New Respiratory Enterovirus and Recombinant Rhinoviruses among Circulating Picornaviruses

by Caroline Tapparel, Thomas Junier, Daniel Gerlach, Sandra Van Belle, Lara Turin, Samuel Cordey, Kathrin Mühlemann, Nicolas Regamey, John-David Aubert, Paola M. Soccal, Philippe Eigenmann, Evgeny M. Zdobnov, Laurent Kaiser
Published 2009-05-01

Viral Metagenomics in the Clinical Realm: Lessons Learned from a Swiss-Wide Ring Trial

by Thomas Junier, Michael Huber, Stefan Schmutz, Verena Kufner, Osvaldo Zagordi, Stefan Neuenschwander, Alban Ramette, Jakub Kubacki, Claudia Bachofen, Weihong Qi, Florian Laubscher, Samuel Cordey, Laurent Kaiser, Christian Beuret, Valérie Barbié, Jacques Fellay, Aitana Lebrand
Published 2019-08-01

Adaptive Strategies in a Poly-Extreme Environment: Differentiation of Vegetative Cells in Serratia ureilytica and Resistance to Extreme Conditions

by Sevasti Filippidou, Sevasti Filippidou, Sevasti Filippidou, Thomas Junier, Tina Wunderlin, Wafa M. Kooli, Ilona Palmieri, Andrej Al-Dourobi, Veronica Molina, Reto Lienhard, Jorge E. Spangenberg, Shannon L. Johnson, Patrick S. G. Chain, Cristina Dorador, Cristina Dorador, Pilar Junier
Published 2019-02-01

Widespread bacterial diversity within the bacteriome of fungi

by Aaron J. Robinson, Geoffrey L. House, Demosthenes P. Morales, Julia M. Kelliher, La Verne Gallegos-Graves, Erick S. LeBrun, Karen W. Davenport, Fabio Palmieri, Andrea Lohberger, Danaé Bregnard, Aislinn Estoppey, Matteo Buffi, Christophe Paul, Thomas Junier, Vincent Hervé, Guillaume Cailleau, Simone Lupini, Hang N. Nguyen, Amy O. Zheng, Luciana Jandelli Gimenes, Saskia Bindschedller, Debora F. Rodrigues, James H. Werner, Jamey D. Young, Pilar Junier, Patrick S. G. Chain
Published 2021-10-01