R-Based Software for the Integration of Pathway Data into Bioinformatic Algorithms

by Frank Kramer, Michaela Bayerlová, Tim Beißbarth
Published 2014-02-01

Detection of simultaneous group effects in microRNA expression and related target gene sets.

by Stephan Artmann, Klaus Jung, Annalen Bleckmann, Tim Beissbarth
Published 2012-01-01

Analysis of Reverse Phase Protein Array Data: From Experimental Design towards Targeted Biomarker Discovery

by Astrid Wachter, Stephan Bernhardt, Tim Beissbarth, Ulrike Korf
Published 2015-11-01

Correction: A comparative study of RNA-Seq and microarray data analysis on the two examples of rectal-cancer patients and Burkitt Lymphoma cells.

by Alexander Wolff, Michaela Bayerlová, Jochen Gaedcke, Dieter Kube, Tim Beißbarth
Published 2019-01-01

Constructing temporal regulatory cascades in the context of development and cell differentiation.

by Rayan Daou, Tim Beißbarth, Edgar Wingender, Mehmet Gültas, Martin Haubrock
Published 2020-01-01

A comparative study of RNA-Seq and microarray data analysis on the two examples of rectal-cancer patients and Burkitt Lymphoma cells.

by Alexander Wolff, Michaela Bayerlová, Jochen Gaedcke, Dieter Kube, Tim Beißbarth
Published 2018-01-01

Newly Constructed Network Models of Different WNT Signaling Cascades Applied to Breast Cancer Expression Data.

by Michaela Bayerlová, Florian Klemm, Frank Kramer, Tobias Pukrop, Tim Beißbarth, Annalen Bleckmann
Published 2015-01-01

IGFBP2 Is a Potential Master Regulator Driving the Dysregulated Gene Network Responsible for Short Survival in Glioblastoma Multiforme

by Manasa Kalya, Manasa Kalya, Alexander Kel, Alexander Kel, Darius Wlochowitz, Edgar Wingender, Tim Beißbarth
Published 2021-06-01

The prognostic capacities of CBP and p300 in locally advanced rectal cancer

by Felix Rühlmann, Indra Maria Windhof-Jaidhauser, Cornelius Menze, Tim Beißbarth, Hanibal Bohnenberger, Michael Ghadimi, Sebastian Dango
Published 2019-12-01

The adaptation of colorectal cancer cells when forming metastases in the liver: expression of associated genes and pathways in a mouse model

by Derya Bocuk, Alexander Wolff, Petra Krause, Gabriela Salinas, Annalen Bleckmann, Christina Hackl, Tim Beissbarth, Sarah Koenig
Published 2017-05-01

Impact of pre-OP independence in patients with limited brain metastases on long-term survival

by Annalen Bleckmann, Benjamin Kirchner, Manuel Nietert, Micha Peeck, Marko Balkenhol, Daniela Egert, T. Veit Rohde, Tim Beißbarth, Tobias Pukrop
Published 2020-10-01

mRNA profiling reveals determinants of trastuzumab efficiency in HER2-positive breast cancer.

by Silvia von der Heyde, Steve Wagner, Alexander Czerny, Manuel Nietert, Fabian Ludewig, Gabriela Salinas-Riester, Dorit Arlt, Tim Beißbarth
Published 2015-01-01

From somatic variants towards precision oncology: Evidence-driven reporting of treatment options in molecular tumor boards

by Júlia Perera-Bel, Barbara Hutter, Christoph Heining, Annalen Bleckmann, Martina Fröhlich, Stefan Fröhling, Hanno Glimm, Benedikt Brors, Tim Beißbarth
Published 2018-03-01

Explaining decisions of graph convolutional neural networks: patient-specific molecular subnetworks responsible for metastasis prediction in breast cancer

by Hryhorii Chereda, Annalen Bleckmann, Kerstin Menck, Júlia Perera-Bel, Philip Stegmaier, Florian Auer, Frank Kramer, Andreas Leha, Tim Beißbarth
Published 2021-03-01

Ror2 Signaling and Its Relevance in Breast Cancer Progression

by Michaela Bayerlová, Kerstin Menck, Florian Klemm, Alexander Wolff, Tobias Pukrop, Tobias Pukrop, Claudia Binder, Tim Beißbarth, Annalen Bleckmann, Annalen Bleckmann
Published 2017-06-01

The CD14 rs2569190 TT Genotype Is Associated with an Improved 30-Day Survival in Patients with Sepsis: A Prospective Observational Cohort Study.

by Ashham Mansur, Benjamin Liese, Maximilian Steinau, Michael Ghadimi, Ingo Bergmann, Mladen Tzvetkov, Aron Frederik Popov, Tim Beissbarth, Martin Bauer, José Hinz
Published 2015-01-01

Anaemia requiring red blood cell transfusion is associated with unfavourable 90-day survival in surgical patients with sepsis

by Katalin Kristof, Benedikt Büttner, Anna Grimm, Caspar Mewes, Bastian Schmack, Aron Frederik Popov, Michael Ghadimi, Tim Beissbarth, José Hinz, Ingo Bergmann, Ashham Mansur
Published 2018-12-01

Genetic Polymorphisms in Endothelin-1 as Predictors for Long-Term Survival and the Cardiac Index in Patients Undergoing On-Pump Cardiac Surgery.

by Ashham Mansur, Maximilian Steinau, Aron Frederik Popov, Sinisa Milenovic, Christian Bireta, Alexander Weymann, Hanna Schotola, Christoph H Wiese, Tim Beissbarth, Mladen Tzvetkov, José Hinz
Published 2015-01-01

Mapping Cellular Microenvironments: Proximity Labeling and Complexome Profiling (Seventh Symposium of the Göttingen Proteomics Forum)

by Oliver Valerius, Abdul R. Asif, Tim Beißbarth, Rainer Bohrer, Hassan Dihazi, Kirstin Feussner, Olaf Jahn, Andrzej Majcherczyk, Bernhard Schmidt, Kerstin Schmitt, Henning Urlaub, Christof Lenz
Published 2019-10-01

TGFβ1 regulates HGF‐induced cell migration and hepatocyte growth factor receptor MET expression via C‐ets‐1 and miR‐128‐3p in basal‐like breast cancer

by Christian Breunig, Nese Erdem, Alexander Bott, Julia F. Greiwe, Eileen Reinz, Stephan Bernhardt, Chiara Giacomelli, Astrid Wachter, Eva J. Kanthelhardt, Tim Beißbarth, Martina Vetter, Stefan Wiemann
Published 2018-09-01