Supergene validation: A model-based protocol for assessing the accuracy of non-model-based supergene methods

by Richard H. Adams, Todd A. Castoe
Published 2019-01-01

Adaptive evolution and functional redesign of core metabolic proteins in snakes.

by Todd A Castoe, Zhi J Jiang, Wanjun Gu, Zhengyuan O Wang, David D Pollock
Published 2008-05-01

Repetitive elements may comprise over two-thirds of the human genome.

by A P Jason de Koning, Wanjun Gu, Todd A Castoe, Mark A Batzer, David D Pollock
Published 2011-12-01

Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development

by Biao Wang, Robert Ekblom, Todd A. Castoe, Eleanor P. Jones, Radoslav Kozma, Erik Bongcam-Rudloff, David D. Pollock, Jacob Höglund
Published 2012-01-01

Bayesian analysis of high-throughput quantitative measurement of protein-DNA interactions.

by David D Pollock, A P Jason de Koning, Hyunmin Kim, Todd A Castoe, Mair E A Churchill, Katerina J Kechris
Published 2011-01-01

Genome-wide data implicate terminal fusion automixis in king cobra facultative parthenogenesis

by Daren C. Card, Freek J. Vonk, Sterrin Smalbrugge, Nicholas R. Casewell, Wolfgang Wüster, Todd A. Castoe, Gordon W. Schuett, Warren Booth
Published 2021-03-01

Whole Genome Amplification and Reduced-Representation Genome Sequencing of Schistosoma japonicum Miracidia.

by Jonathan A Shortt, Daren C Card, Drew R Schield, Yang Liu, Bo Zhong, Todd A Castoe, Elizabeth J Carlton, David D Pollock
Published 2017-01-01

Growth and stress response mechanisms underlying post-feeding regenerative organ growth in the Burmese python

by Audra L. Andrew, Blair W. Perry, Daren C. Card, Drew R. Schield, Robert P. Ruggiero, Suzanne E. McGaugh, Amit Choudhary, Stephen M. Secor, Todd A. Castoe
Published 2017-05-01

Comparative phylogeographic analyses illustrate the complex evolutionary history of threatened cloud forests of northern Mesoamerica.

by Juan Francisco Ornelas, Victoria Sosa, Douglas E Soltis, Juan M Daza, Clementina González, Pamela S Soltis, Carla Gutiérrez-Rodríguez, Alejandro Espinosa de los Monteros, Todd A Castoe, Charles Bell, Eduardo Ruiz-Sanchez
Published 2013-01-01

Population genomic analyses of schistosome parasites highlight critical challenges facing endgame elimination efforts

by Jonathan A. Shortt, Laura E. Timm, Nicole R. Hales, Zachary L. Nikolakis, Drew R. Schield, Blair W. Perry, Yang Liu, Bo Zhong, Todd A. Castoe, Elizabeth J. Carlton, David D. Pollock
Published 2021-03-01

Patterns of relatedness and genetic diversity inferred from whole genome sequencing of archival blood fluke miracidia (Schistosoma japonicum).

by Zachary L Nikolakis, Nicole R Hales, Blair W Perry, Drew R Schield, Laura E Timm, Yang Liu, Bo Zhong, Katerina J Kechris, Elizabeth J Carlton, David D Pollock, Todd A Castoe
Published 2021-01-01

Two low coverage bird genomes and a comparison of reference-guided versus de novo genome assemblies.

by Daren C Card, Drew R Schield, Jacobo Reyes-Velasco, Matthew K Fujita, Audra L Andrew, Sara J Oyler-McCance, Jennifer A Fike, Diana F Tomback, Robert P Ruggiero, Todd A Castoe
Published 2014-01-01

Squamate reptiles challenge paradigms of genomic repeat element evolution set by birds and mammals

by Giulia I. M. Pasquesi, Richard H. Adams, Daren C. Card, Drew R. Schield, Andrew B. Corbin, Blair W. Perry, Jacobo Reyes-Velasco, Robert P. Ruggiero, Michael W. Vandewege, Jonathan A. Shortt, Todd A. Castoe
Published 2018-07-01

Correction: Rapid Microsatellite Identification from Illumina Paired-End Genomic Sequencing in Two Birds and a Snake.

by Todd A Castoe, Alexander W Poole, A P Jason de Koning, Kenneth L Jones, Diana F Tomback, Sara J Oyler-McCance, Jennifer A Fike, Stacey L Lance, Jeffrey W Streicher, Eric N Smith, David D Pollock
Published 2015-01-01

Rapid microsatellite identification from Illumina paired-end genomic sequencing in two birds and a snake.

by Todd A Castoe, Alexander W Poole, A P Jason de Koning, Kenneth L Jones, Diana F Tomback, Sara J Oyler-McCance, Jennifer A Fike, Stacey L Lance, Jeffrey W Streicher, Eric N Smith, David D Pollock
Published 2012-01-01