Application of the SwissDrugDesign Online Resources in Virtual Screening

by Antoine Daina, Vincent Zoete
Published 2019-09-01

T-cell receptors binding orientation over peptide/MHC class I is driven by long-range interactions.

by Mathias Ferber, Vincent Zoete, Olivier Michielin
Published 2012-01-01

Recurrent Structural Motifs in Non-Homologous Protein Structures

by Nicolas Guex, Vincent Zoete, Maria U. Johansson
Published 2013-04-01

Analysis of Secondary Structure Biases in Naturally Presented HLA-I Ligands

by Marta A. S. Perez, Marta A. S. Perez, Michal Bassani-Sternberg, George Coukos, David Gfeller, David Gfeller, Vincent Zoete, Vincent Zoete
Published 2019-11-01

Distinct OGT-Binding Sites Promote HCF-1 Cleavage.

by Tanja Bhuiyan, Patrice Waridel, Vaibhav Kapuria, Vincent Zoete, Winship Herr
Published 2015-01-01

The caveolin-binding motif of the pathogen-related yeast protein Pry1, a member of the CAP protein superfamily, is required for in vivo export of cholesteryl acetate

by Vineet Choudhary, Rabih Darwiche, David Gfeller, Vincent Zoete, Olivier Michielin, Roger Schneiter
Published 2014-05-01

Swiss-PO: a new tool to analyze the impact of mutations on protein three-dimensional structures for precision oncology

by Fanny S. Krebs, Vincent Zoete, Maxence Trottet, Timothée Pouchon, Christophe Bovigny, Olivier Michielin
Published 2021-03-01

Model structure of human APOBEC3G.

by Kun-Lin Zhang, Bastien Mangeat, Millan Ortiz, Vincent Zoete, Didier Trono, Amalio Telenti, Olivier Michielin
Published 2007-04-01

Monoubiquitination and activity of the paracaspase MALT1 requires glutamate 549 in the dimerization interface.

by Katrin Cabalzar, Christiane Pelzer, Annette Wolf, Georg Lenz, Justyna Iwaszkiewicz, Vincent Zoete, Stephan Hailfinger, Margot Thome
Published 2013-01-01

Prediction of cross-recognition of peptide-HLA A2 by Melan-A-specific cytotoxic T lymphocytes using three-dimensional quantitative structure-activity relationships.

by Theres Fagerberg, Vincent Zoete, Sebastien Viatte, Petra Baumgaertner, Pedro M Alves, Pedro Romero, Daniel E Speiser, Olivier Michielin
Published 2013-01-01

TCRep 3D: an automated in silico approach to study the structural properties of TCR repertoires.

by Antoine Leimgruber, Mathias Ferber, Melita Irving, Hamid Hussain-Kahn, Sébastien Wieckowski, Laurent Derré, Nathalie Rufer, Vincent Zoete, Olivier Michielin
Published 2011-01-01

The Peroxisomal Enzyme L-PBE Is Required to Prevent the Dietary Toxicity of Medium-Chain Fatty Acids

by Jun Ding, Ursula Loizides-Mangold, Gianpaolo Rando, Vincent Zoete, Olivier Michielin, Janardan K. Reddy, Walter Wahli, Howard Riezman, Bernard Thorens
Published 2013-10-01

Trametinib Induces the Stabilization of a Dual <i>GNAQ</i> p.Gly48Leu- and <i>FGFR4</i> p.Cys172Gly-Mutated Uveal Melanoma. The Role of Molecular Modelling in Personalized Oncology

by Fanny S. Krebs, Camille Gérard, Alexandre Wicky, Veronica Aedo-Lopez, Edoardo Missiaglia, Bettina Bisig, Mounir Trimech, Olivier Michielin, Krisztian Homicsko, Vincent Zoete
Published 2020-10-01

Identification of human IKK-2 inhibitors of natural origin (part I): modeling of the IKK-2 kinase domain, virtual screening and activity assays.

by Esther Sala, Laura Guasch, Justyna Iwaszkiewicz, Miquel Mulero, Maria-Josepa Salvadó, Montserrat Pinent, Vincent Zoete, Aurélien Grosdidier, Santiago Garcia-Vallvé, Olivier Michielin, Gerard Pujadas
Published 2011-02-01

Design of short peptides to block BTLA/HVEM interactions for promoting anticancer T-cell responses.

by Marta Spodzieja, Sławomir Lach, Justyna Iwaszkiewicz, Valérie Cesson, Katarzyna Kalejta, Daniel Olive, Olivier Michielin, Daniel E Speiser, Vincent Zoete, Laurent Derré, Sylwia Rodziewicz-Motowidło
Published 2017-01-01

Deciphering the Mechanisms of Improved Immunogenicity of Hypochlorous Acid-Treated Antigens in Anti-Cancer Dendritic Cell-Based Vaccines

by Michele Graciotti, Fabio Marino, HuiSong Pak, Petra Baumgaertner, Anne-Christine Thierry, Johanna Chiffelle, Marta A. S. Perez, Vincent Zoete, Alexandre Harari, Michal Bassani-Sternberg, Lana E. Kandalaft
Published 2020-06-01

Herpes simplex encephalitis in adult patients with MASP-2 deficiency.

by Stéphanie Bibert, Jocelyne Piret, Mathieu Quinodoz, Emilie Collinet, Vincent Zoete, Olivier Michielin, Rafik Menasria, Pascal Meylan, Titus Bihl, Véronique Erard, Florence Fellmann, Carlo Rivolta, Guy Boivin, Pierre-Yves Bochud
Published 2019-12-01

Disulfide-Linked Peptides for Blocking BTLA/HVEM Binding

by Marta Spodzieja, Katarzyna Kuncewicz, Adam Sieradzan, Agnieszka Karczyńska, Justyna Iwaszkiewicz, Valérie Cesson, Katarzyna Węgrzyn, Igor Zhukov, Martyna Maszota-Zieleniak, Olivier Michielin, Daniel E. Speiser, Vincent Zoete, Laurent Derré, Sylwia Rodziewicz-Motowidło
Published 2020-01-01

Sensitive and frequent identification of high avidity neo-epitope specific CD8 + T cells in immunotherapy-naive ovarian cancer

by Sara Bobisse, Raphael Genolet, Annalisa Roberti, Janos L. Tanyi, Julien Racle, Brian J. Stevenson, Christian Iseli, Alexandra Michel, Marie-Aude Le Bitoux, Philippe Guillaume, Julien Schmidt, Valentina Bianchi, Denarda Dangaj, Craig Fenwick, Laurent Derré, Ioannis Xenarios, Olivier Michielin, Pedro Romero, Dimitri S. Monos, Vincent Zoete, David Gfeller, Lana E. Kandalaft, George Coukos, Alexandre Harari
Published 2018-03-01

A community proposal to integrate structural bioinformatics activities in ELIXIR (3D-Bioinfo Community) [version 1; peer review: 1 approved, 3 approved with reservations]

by Christine Orengo, Sameer Velankar, Shoshana Wodak, Vincent Zoete, Alexandre M.J.J. Bonvin, Arne Elofsson, K. Anton Feenstra, Dietland L. Gerloff, Thomas Hamelryck, John M. Hancock, Manuela Helmer-Citterich, Adam Hospital, Modesto Orozco, Anastassis Perrakis, Matthias Rarey, Claudio Soares, Joel L. Sussman, Janet M. Thornton, Pierre Tuffery, Gabor Tusnady, Rikkert Wierenga, Tiina Salminen, Bohdan Schneider
Published 2020-04-01