Analysis of RNA Modifications by Second- and Third-Generation Deep Sequencing: 2020 Update

by Yuri Motorin, Virginie Marchand
Published 2021-02-01

Methods for RNA Modification Mapping Using Deep Sequencing: Established and New Emerging Technologies

by Yuri Motorin, Mark Helm
Published 2019-01-01

Detection and Analysis of RNA Ribose 2′-<i>O</i>-Methylations: Challenges and Solutions

by Yuri Motorin, Virginie Marchand
Published 2018-12-01

Limited antibody specificity compromises epitranscriptomic analyses

by Mark Helm, Frank Lyko, Yuri Motorin
Published 2019-12-01

Use of Specific Chemical Reagents for Detection of Modified Nucleotides in RNA

by Isabelle Behm-Ansmant, Mark Helm, Yuri Motorin
Published 2011-01-01

Non-Redundant tRNA Reference Sequences for Deep Sequencing Analysis of tRNA Abundance and Epitranscriptomic RNA Modifications

by Florian PICHOT, Virginie MARCHAND, Mark HELM, Yuri MOTORIN
Published 2021-01-01

Cell culture NAIL-MS allows insight into human tRNA and rRNA modification dynamics in vivo

by Matthias Heiss, Felix Hagelskamp, Virginie Marchand, Yuri Motorin, Stefanie Kellner
Published 2021-01-01

Holistic Optimization of Bioinformatic Analysis Pipeline for Detection and Quantification of 2′-O-Methylations in RNA by RiboMethSeq

by Florian Pichot, Florian Pichot, Florian Pichot, Virginie Marchand, Lilia Ayadi, Lilia Ayadi, Valérie Bourguignon-Igel, Valérie Bourguignon-Igel, Mark Helm, Yuri Motorin, Yuri Motorin
Published 2020-02-01

CoverageAnalyzer (CAn): A Tool for Inspection of Modification Signatures in RNA Sequencing Profiles

by Ralf Hauenschild, Stephan Werner, Lyudmil Tserovski, Andreas Hildebrandt, Yuri Motorin, Mark Helm
Published 2016-11-01

Graphical Workflow System for Modification Calling by Machine Learning of Reverse Transcription Signatures

by Lukas Schmidt, Stephan Werner, Thomas Kemmer, Stefan Niebler, Marco Kristen, Lilia Ayadi, Lilia Ayadi, Patrick Johe, Virginie Marchand, Tanja Schirmeister, Yuri Motorin, Yuri Motorin, Andreas Hildebrandt, Bertil Schmidt, Mark Helm
Published 2019-09-01

Manganese Ions Individually Alter the Reverse Transcription Signature of Modified Ribonucleosides

by Marco Kristen, Johanna Plehn, Virginie Marchand, Kristina Friedland, Yuri Motorin, Mark Helm, Stephan Werner
Published 2020-08-01

Next‐Generation Sequencing‐Based RiboMethSeq  Protocol for Analysis of tRNA 2′‐O‐Methylation

by Virginie Marchand, Florian Pichot, Kathrin Thüring, Lilia Ayadi, Isabel Freund, Alexander Dalpke, Mark Helm, Yuri Motorin
Published 2017-02-01

Eukaryotic rRNA Modification by Yeast 5-Methylcytosine-Methyltransferases and Human Proliferation-Associated Antigen p120.

by Gabrielle Bourgeois, Michel Ney, Imre Gaspar, Christelle Aigueperse, Matthias Schaefer, Stefanie Kellner, Mark Helm, Yuri Motorin
Published 2015-01-01

Survey and Validation of tRNA Modifications and Their Corresponding Genes in <i>Bacillus subtilis</i> sp Subtilis Strain 168

by Valérie de Crécy-Lagard, Robert L. Ross, Marshall Jaroch, Virginie Marchand, Christina Eisenhart, Damien Brégeon, Yuri Motorin, Patrick A. Limbach
Published 2020-06-01

Contribution of protein Gar1 to the RNA-guided and RNA-independent rRNA:Ψ-synthase activities of the archaeal Cbf5 protein

by Ryosuke Fujikane, Isabelle Behm-Ansmant, Anne-Sophie Tillault, Christine Loegler, Valérie Igel-Bourguignon, Evelyne Marguet, Patrick Forterre, Christiane Branlant, Yuri Motorin, Bruno Charpentier
Published 2018-09-01

FTO-mediated cytoplasmic m6Am demethylation adjusts stem-like properties in colorectal cancer cell

by Sébastien Relier, Julie Ripoll, Hélène Guillorit, Amandine Amalric, Cyrinne Achour, Florence Boissière, Jérôme Vialaret, Aurore Attina, Françoise Debart, Armelle Choquet, Françoise Macari, Virginie Marchand, Yuri Motorin, Emmanuelle Samalin, Jean-Jacques Vasseur, Julie Pannequin, Francesca Aguilo, Evelyne Lopez-Crapez, Christophe Hirtz, Eric Rivals, Amandine Bastide, Alexandre David
Published 2021-03-01

2,6-Diaminopurine as a highly potent corrector of UGA nonsense mutations

by Carole Trzaska, Séverine Amand, Christine Bailly, Catherine Leroy, Virginie Marchand, Evelyne Duvernois-Berthet, Jean-Michel Saliou, Hana Benhabiles, Elisabeth Werkmeister, Thierry Chassat, Romain Guilbert, David Hannebique, Anthony Mouray, Marie-Christine Copin, Pierre-Arthur Moreau, Eric Adriaenssens, Andreas Kulozik, Eric Westhof, David Tulasne, Yuri Motorin, Sylvie Rebuffat, Fabrice Lejeune
Published 2020-03-01

Publisher Correction: A PRDX1 mutant allele causes a MMACHC secondary epimutation in cblC patients

by Jean-Louis Guéant, Céline Chéry, Abderrahim Oussalah, Javad Nadaf, David Coelho, Thomas Josse, Justine Flayac, Aurélie Robert, Isabelle Koscinski, Isabelle Gastin, Pierre Filhine-Tresarrieu, Mihaela Pupavac, Alison Brebner, David Watkins, Tomi Pastinen, Alexandre Montpetit, Fadi Hariri, David Tregouët, Benjamin A Raby, Wendy K. Chung, Pierre-Emmanuel Morange, D. Sean Froese, Matthias R. Baumgartner, Jean-François Benoist, Can Ficicioglu, Virginie Marchand, Yuri Motorin, Chrystèle Bonnemains, François Feillet, Jacek Majewski, David S. Rosenblatt
Published 2018-02-01

A PRDX1 mutant allele causes a MMACHC secondary epimutation in cblC patients

by Jean-Louis Guéant, Céline Chéry, Abderrahim Oussalah, Javad Nadaf, David Coelho, Thomas Josse, Justine Flayac, Aurélie Robert, Isabelle Koscinski, Isabelle Gastin, Pierre Filhine-Tresarrieu, Mihaela Pupavac, Alison Brebner, David Watkins, Tomi Pastinen, Alexandre Montpetit, Fadi Hariri, David Tregouët, Benjamin A Raby, Wendy K. Chung, Pierre-Emmanuel Morange, D. Sean Froese, Matthias R. Baumgartner, Jean-François Benoist, Can Ficicioglu, Virginie Marchand, Yuri Motorin, Chrystèle Bonnemains, François Feillet, Jacek Majewski, David S. Rosenblatt
Published 2018-01-01