Dynamic construction of pan-genome subgraphs
Marcus et al. (Bioinformatics 2014) proposed to use a compressed de Bruijn graph as a description of a pan-genome, comprising the genomes of many individuals/strains of the same or closely related species. Subsequent work improved the construction of the compressed de Bruijn graph in terms of run-ti...
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
| Published: |
De Gruyter
2020-04-01
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| Series: | Open Computer Science |
| Subjects: | |
| Online Access: | https://doi.org/10.1515/comp-2020-0018 |