A method for the allocation of sequencing resources in genotyped livestock populations

A method for the allocation of sequencing resources in genotyped livestock populations

Abstract Background This paper describes a method, called AlphaSeqOpt, for the allocation of sequencing resources in livestock populations with existing phased genomic data to maximise the ability to phase and impute sequenced haplotypes into the whole population. Methods We present two algorithms....

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Bibliographic Details
Main Authors: Serap Gonen, Roger Ros-Freixedes, Mara Battagin, Gregor Gorjanc, John M. Hickey
Format: Article
Language:deu
Published: BMC 2017-05-01
Series:Genetics Selection Evolution
Subjects:
Sequence Level
Differential Evolution Algorithm
Focal Individual
Livestock Population
Quantitative Trait Nucleotide
Online Access:http://link.springer.com/article/10.1186/s12711-017-0322-5

Internet

http://link.springer.com/article/10.1186/s12711-017-0322-5

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