TP53 mutation spectrum in smokers and never smoking lung cancer patients

AbstractBackground: TP53 mutations are among the most common mutations found in lung cancers, identified as an independent prognostic factor in many types of cancers. The purpose of this study was to investigate the frequency and prognostic impact of TP53 mutations in never-smokers and in different...

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Main Authors: Ann Rita Halvorsen, Laxmi eSilwal-Pandit, Leonardo A Meza-Zepeda, Daniel eVodak, Phuong eVu, Camilla eSagerup, Eivind eHovig, Ola eMyklbost, Anne-Lise eBørresen-Dale, Odd Terje Brustugun, Åslaug eHelland
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-05-01
Series:Frontiers in Genetics
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fgene.2016.00085/full
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spelling doaj-07cc48300421472889799803c163b7cd2020-11-24T22:48:13ZengFrontiers Media S.A.Frontiers in Genetics1664-80212016-05-01710.3389/fgene.2016.00085195636TP53 mutation spectrum in smokers and never smoking lung cancer patientsAnn Rita Halvorsen0Laxmi eSilwal-Pandit1Leonardo A Meza-Zepeda2Leonardo A Meza-Zepeda3Daniel eVodak4Phuong eVu5Camilla eSagerup6Eivind eHovig7Eivind eHovig8Eivind eHovig9Ola eMyklbost10Anne-Lise eBørresen-Dale11Anne-Lise eBørresen-Dale12Odd Terje Brustugun13Odd Terje Brustugun14Åslaug eHelland15Åslaug eHelland16Department of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Tumour Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, NorwayGenomics Core Facility, Department of Core Facilities, Institute for Cancer Research, Oslo University Hospital, NorwayDepartment of Tumour Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Tumour Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, NorwayDepartment of Informatics, University of Oslo, Oslo, NorwayInstitute of Cancer Genetics and Informatics, Oslo University Hospital, Oslo, NorwayDepartment of Tumour Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayInstitute for Clinical Medicine, Faculty of Medicine, University of Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Oncology, Oslo University Hospital-The Norwegian Radium Hospital, Oslo, NorwayDepartment of Cancer Genetics, Institute for Cancer Research, Oslo University Hospital – The Norwegian Radium Hospital, Oslo, NorwayDepartment of Oncology, Oslo University Hospital-The Norwegian Radium Hospital, Oslo, NorwayAbstractBackground: TP53 mutations are among the most common mutations found in lung cancers, identified as an independent prognostic factor in many types of cancers. The purpose of this study was to investigate the frequency and prognostic impact of TP53 mutations in never-smokers and in different histological subtypes of lung cancer.Methods: We analysed tumour tissue from 394 non-small cell carcinomas including adenocarcinomas (n=229), squamous cell carcinomas (n=112), large cell carcinomas (n=30) and others (n=23) for mutations in TP53 by the use of Sanger sequencing (n=394) and next generation sequencing (n=100). Results: TP53 mutations were identified in 47.2% of the samples, with the highest frequency (65%) of mutations among squamous cell carcinomas. Among never-smokers, 36% carried a TP53 mutation, identified as a significant independent negative prognostic factor in this subgroup. For large cell carcinomas, a significantly prolonged progression free survival was found for those carrying a TP53 mutation. In addition, the frequency of frameshift mutations was doubled in squamous cell carcinomas (20.3%) compared to adenocarcinomas (9.1%).Conclusion: TP53 mutation patterns differ between the histological subgroups of lung cancers, as also influenced by smoking history. This indicates that the histological subtypes in lung cancer are genetically different, and that smoking-induced TP53 mutations may have a different biological impact than TP53 mutations occurring in never-smokers.http://journal.frontiersin.org/Journal/10.3389/fgene.2016.00085/fulllung cancerTP53Mutation spectrumSquamous cell carcinomasNever smokersAdenocarcinomas
collection DOAJ
language English
format Article
sources DOAJ
author Ann Rita Halvorsen
Laxmi eSilwal-Pandit
Leonardo A Meza-Zepeda
Leonardo A Meza-Zepeda
Daniel eVodak
Phuong eVu
Camilla eSagerup
Eivind eHovig
Eivind eHovig
Eivind eHovig
Ola eMyklbost
Anne-Lise eBørresen-Dale
Anne-Lise eBørresen-Dale
Odd Terje Brustugun
Odd Terje Brustugun
Åslaug eHelland
Åslaug eHelland
spellingShingle Ann Rita Halvorsen
Laxmi eSilwal-Pandit
Leonardo A Meza-Zepeda
Leonardo A Meza-Zepeda
Daniel eVodak
Phuong eVu
Camilla eSagerup
Eivind eHovig
Eivind eHovig
Eivind eHovig
Ola eMyklbost
Anne-Lise eBørresen-Dale
Anne-Lise eBørresen-Dale
Odd Terje Brustugun
Odd Terje Brustugun
Åslaug eHelland
Åslaug eHelland
TP53 mutation spectrum in smokers and never smoking lung cancer patients
Frontiers in Genetics
lung cancer
TP53
Mutation spectrum
Squamous cell carcinomas
Never smokers
Adenocarcinomas
author_facet Ann Rita Halvorsen
Laxmi eSilwal-Pandit
Leonardo A Meza-Zepeda
Leonardo A Meza-Zepeda
Daniel eVodak
Phuong eVu
Camilla eSagerup
Eivind eHovig
Eivind eHovig
Eivind eHovig
Ola eMyklbost
Anne-Lise eBørresen-Dale
Anne-Lise eBørresen-Dale
Odd Terje Brustugun
Odd Terje Brustugun
Åslaug eHelland
Åslaug eHelland
author_sort Ann Rita Halvorsen
title TP53 mutation spectrum in smokers and never smoking lung cancer patients
title_short TP53 mutation spectrum in smokers and never smoking lung cancer patients
title_full TP53 mutation spectrum in smokers and never smoking lung cancer patients
title_fullStr TP53 mutation spectrum in smokers and never smoking lung cancer patients
title_full_unstemmed TP53 mutation spectrum in smokers and never smoking lung cancer patients
title_sort tp53 mutation spectrum in smokers and never smoking lung cancer patients
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2016-05-01
description AbstractBackground: TP53 mutations are among the most common mutations found in lung cancers, identified as an independent prognostic factor in many types of cancers. The purpose of this study was to investigate the frequency and prognostic impact of TP53 mutations in never-smokers and in different histological subtypes of lung cancer.Methods: We analysed tumour tissue from 394 non-small cell carcinomas including adenocarcinomas (n=229), squamous cell carcinomas (n=112), large cell carcinomas (n=30) and others (n=23) for mutations in TP53 by the use of Sanger sequencing (n=394) and next generation sequencing (n=100). Results: TP53 mutations were identified in 47.2% of the samples, with the highest frequency (65%) of mutations among squamous cell carcinomas. Among never-smokers, 36% carried a TP53 mutation, identified as a significant independent negative prognostic factor in this subgroup. For large cell carcinomas, a significantly prolonged progression free survival was found for those carrying a TP53 mutation. In addition, the frequency of frameshift mutations was doubled in squamous cell carcinomas (20.3%) compared to adenocarcinomas (9.1%).Conclusion: TP53 mutation patterns differ between the histological subgroups of lung cancers, as also influenced by smoking history. This indicates that the histological subtypes in lung cancer are genetically different, and that smoking-induced TP53 mutations may have a different biological impact than TP53 mutations occurring in never-smokers.
topic lung cancer
TP53
Mutation spectrum
Squamous cell carcinomas
Never smokers
Adenocarcinomas
url http://journal.frontiersin.org/Journal/10.3389/fgene.2016.00085/full
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