Fast computation of genome-metagenome interaction effects

Fast computation of genome-metagenome interaction effects

Abstract Motivation Association studies have been widely used to search for associations between common genetic variants observations and a given phenotype. However, it is now generally accepted that genes and environment must be examined jointly when estimating phenotypic variance. In this work we...

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Bibliographic Details
Main Authors: Florent Guinot, Marie Szafranski, Julien Chiquet, Anouk Zancarini, Christine Le Signor, Christophe Mougel, Christophe Ambroise
Format: Article
Language:English
Published: BMC 2020-07-01
Series:Algorithms for Molecular Biology
Subjects:
Statistical machine learning
Variable selection
Dimensionality reduction
Gene-environement interactions
GWAS
Genetic and metagenomic markers
Online Access:http://link.springer.com/article/10.1186/s13015-020-00173-2

Internet

http://link.springer.com/article/10.1186/s13015-020-00173-2

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