An Affinity Propagation-Based DNA Motif Discovery Algorithm

The planted (l,d) motif search (PMS) is one of the fundamental problems in bioinformatics, which plays an important role in locating transcription factor binding sites (TFBSs) in DNA sequences. Nowadays, identifying weak motifs and reducing the effect of local optimum are still important but challen...

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Bibliographic Details
Main Authors: Chunxiao Sun, Hongwei Huo, Qiang Yu, Haitao Guo, Zhigang Sun
Format: Article
Language:English
Published: Hindawi Limited 2015-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2015/853461