PATtyFams: Protein families for the microbial genomes in the PATRIC database

PATtyFams: Protein families for the microbial genomes in the PATRIC database

The ability to build accurate protein families is a fundamental operation in bioinformatics that influences comparative analyses, genome annotation and metabolic modeling. For several years we have been maintaining protein families for all microbial genomes in the PATRIC database (Pathosystems Reso...

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Bibliographic Details
Main Authors: James J Davis, Svetlana eGerdes, Gary J Olsen, Robert eOlson, Gordon D Pusch, Maulik eShukla, Veronika eVonstein, Alice R Wattam, Hyunseung eYoo
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-02-01
Series:Frontiers in Microbiology
Subjects:
Comparative genomics
Genome annotation
metabolic modeling
RAST
FIGfams
Online Access:http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00118/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.00118/full

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