A Nuclear Ribosomal DNA Phylogeny of Acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analysis of 606 Sequences

A Nuclear Ribosomal DNA Phylogeny of Acer Inferred with Maximum Likelihood, Splits Graphs, and Motif Analysis of 606 Sequences

The multi-copy internal transcribed spacer (ITS) region of nuclear ribosomal DNA is widely used to infer phylogenetic relationships among closely related taxa. Here we use maximum likelihood (ML) and splits graph analyses to extract phylogenetic information from ~ 600 mostly cloned ITS sequences, re...

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Bibliographic Details
Main Authors: Guido W. Grimm, Susanne S. Renner, Alexandros Stamatakis, Vera Hemleben
Format: Article
Language:English
Published: SAGE Publishing 2006-01-01
Series:Evolutionary Bioinformatics
Subjects:
Bipartition networks
large-scale maximum likelihood analyses
neighbor-nets
RAxML
ribosomal DNA
ITS sequence motifs
Online Access:http://la-press.com/article.php?article_id=132

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http://la-press.com/article.php?article_id=132

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