On docking, scoring and assessing protein-DNA complexes in a rigid-body framework.

We consider the identification of interacting protein-nucleic acid partners using the rigid body docking method FTdock, which is systematic and exhaustive in the exploration of docking conformations. The accuracy of rigid body docking methods is tested using known protein-DNA complexes for which the...

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Bibliographic Details
Main Authors: Marc Parisien, Karl F Freed, Tobin R Sosnick
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3290582?pdf=render