Proficiency Testing of Metagenomics-Based Detection of Food-Borne Pathogens Using a Complex Artificial Sequencing Dataset
Metagenomics-based high-throughput sequencing (HTS) enables comprehensive detection of all species comprised in a sample with a single assay and is becoming a standard method for outbreak investigation. However, unlike real-time PCR or serological assays, HTS datasets generated for pathogen detectio...
Main Authors: | Dirk Höper, Josephine Grützke, Annika Brinkmann, Joël Mossong, Sébastien Matamoros, Richard J. Ellis, Carlus Deneke, Simon H. Tausch, Isabel Cuesta, Sara Monzón, Miguel Juliá, Thomas Nordahl Petersen, Rene S. Hendriksen, Sünje J. Pamp, Mikael Leijon, Mikhayil Hakhverdyan, Aaron M. Walsh, Paul D. Cotter, Lakshmi Chandrasekaran, Moon Y. F. Tay, Joergen Schlundt, Claudia Sala, Alessandra De Cesare, Andreas Nitsche, Martin Beer, Claudia Wylezich |
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Format: | Article |
Language: | English |
Published: |
Frontiers Media S.A.
2020-11-01
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Series: | Frontiers in Microbiology |
Subjects: | |
Online Access: | https://www.frontiersin.org/articles/10.3389/fmicb.2020.575377/full |
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