Genome Sequence Analysis of Clostridium chauvoei Strains of European Origin and Evaluation of Typing Options for Outbreak Investigations

Genome Sequence Analysis of Clostridium chauvoei Strains of European Origin and Evaluation of Typing Options for Outbreak Investigations

Black quarter caused by Clostridium (C.) chauvoei is an important bacterial disease that affects cattle and sheep with high mortality. A comparative genomics analysis of 64 C. chauvoei strains, most of European origin and a few of non-European and unknown origin, was performed. The pangenome analysi...

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Bibliographic Details
Main Authors: Prasad Thomas, Mostafa Y. Abdel-Glil, Inga Eichhorn, Torsten Semmler, Christiane Werckenthin, Christina Baumbach, Wybke Murmann, Anne Bodenthin-Drauschke, Pia Zimmermann, Ulrich Schotte, Domenico Galante, Durda Slavic, Martin Wagner, Lothar H. Wieler, Heinrich Neubauer, Christian Seyboldt
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-09-01
Series:Frontiers in Microbiology
Subjects:
strain typing
Clostridium chauvoei
genome analysis
pangenome SNPs
CRISPR spacer-typing
cgMLST
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.732106/full

Internet

https://www.frontiersin.org/articles/10.3389/fmicb.2021.732106/full

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