stLFRsv: A Germline Structural Variant Analysis Pipeline Using Co-barcoded Reads

stLFRsv: A Germline Structural Variant Analysis Pipeline Using Co-barcoded Reads

Co-barcoded reads originating from long DNA fragments (mean length >30 kbp) maintain both single base level accuracy and long-range genomic information. We propose a pipeline, stLFRsv, to detect structural variation using co-barcoded reads. stLFRsv identifies abnormal large gaps between co-ba...

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Bibliographic Details
Main Authors: Junfu Guo, Chang Shi, Xi Chen, Ou Wang, Ping Liu, Huanming Yang, Xun Xu, Wenwei Zhang, Hongmei Zhu
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Genetics
Subjects:
: human genome
co-barcoded reads
structural variation
complex variants
breakpoints
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.636239/full

Internet

https://www.frontiersin.org/articles/10.3389/fgene.2021.636239/full

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