CircSLNN: Identifying RBP-Binding Sites on circRNAs via Sequence Labeling Neural Networks

CircSLNN: Identifying RBP-Binding Sites on circRNAs via Sequence Labeling Neural Networks

The interactions between RNAs and RNA binding proteins (RBPs) are crucial for understanding post-transcriptional regulation mechanisms. A lot of computational tools have been developed to automatically predict the binding relationship between RNAs and RBPs. However, most of the methods can only pred...

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Bibliographic Details
Main Authors: Yuqi Ju, Liangliang Yuan, Yang Yang, Hai Zhao
Format: Article
Language:English
Published: Frontiers Media S.A. 2019-11-01
Series:Frontiers in Genetics
Subjects:
RNA–protein binding sites
sequence labeling
convolutional neural network
bidirectional LSTM neural network
deep learning
Online Access:https://www.frontiersin.org/article/10.3389/fgene.2019.01184/full

Internet

https://www.frontiersin.org/article/10.3389/fgene.2019.01184/full

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