A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration

Abstract Background The configuration of necrotic areas within the retinal pigmented epithelium is an important element in the progression of age-related macular degeneration (AMD). In the exudative (wet) and non-exudative (dry) forms of the disease, retinal pigment epithelial (RPE) cells respond to...

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Main Authors: Qanita Bani Baker, Gregory J. Podgorski, Elizabeth Vargis, Nicholas S. Flann
Format: Article
Language:English
Published: BMC 2017-08-01
Series:Journal of Biological Engineering
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13036-017-0063-6
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spelling doaj-227b73ca440d4c009a168d5e3d2805122020-11-24T22:00:06ZengBMCJournal of Biological Engineering1754-16112017-08-011111810.1186/s13036-017-0063-6A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degenerationQanita Bani Baker0Gregory J. Podgorski1Elizabeth Vargis2Nicholas S. Flann3Jordan University of Science and TechnologyBiology Department, Utah State UniversityBiological Engineering Department, Utah State UniversitySynthetic Biomanufacturing InstituteAbstract Background The configuration of necrotic areas within the retinal pigmented epithelium is an important element in the progression of age-related macular degeneration (AMD). In the exudative (wet) and non-exudative (dry) forms of the disease, retinal pigment epithelial (RPE) cells respond to adjacent atrophied regions by secreting vascular endothelial growth factor (VEGF) that in turn recruits new blood vessels which lead to a further reduction in retinal function and vision. In vitro models exist for studying VEGF expression in wet AMD (Vargis et al., Biomaterials 35(13):3999–4004, 2014), but are limited in the patterns of necrotic and intact RPE epithelium they can produce and in their ability to finely resolve VEGF expression dynamics. Results In this work, an in silico hybrid agent-based model was developed and validated using the results of this cell culture model of VEGF expression in AMD. The computational model was used to extend the cell culture investigation to explore the dynamics of VEGF expression in different sized patches of RPE cells and the role of negative feedback in VEGF expression. Results of the simulation and the cell culture studies were in excellent qualitative agreement, and close quantitative agreement. Conclusions The model indicated that the configuration of necrotic and RPE cell-containing regions have a major impact on VEGF expression dynamics and made precise predictions of VEGF expression dynamics by groups of RPE cells of various sizes and configurations. Coupled with biological studies, this model may give insights into key molecular mechanisms of AMD progression and open routes to more effective treatments.http://link.springer.com/article/10.1186/s13036-017-0063-6MicropatterningAuto-regulationVascular endothelial growth factorAge-related macular degenerationRetinal pigment epithelial cellsAge-related macular degeneration
collection DOAJ
language English
format Article
sources DOAJ
author Qanita Bani Baker
Gregory J. Podgorski
Elizabeth Vargis
Nicholas S. Flann
spellingShingle Qanita Bani Baker
Gregory J. Podgorski
Elizabeth Vargis
Nicholas S. Flann
A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
Journal of Biological Engineering
Micropatterning
Auto-regulation
Vascular endothelial growth factor
Age-related macular degeneration
Retinal pigment epithelial cells
Age-related macular degeneration
author_facet Qanita Bani Baker
Gregory J. Podgorski
Elizabeth Vargis
Nicholas S. Flann
author_sort Qanita Bani Baker
title A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
title_short A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
title_full A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
title_fullStr A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
title_full_unstemmed A computational study of VEGF production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
title_sort computational study of vegf production by patterned retinal epithelial cell colonies as a model for neovascular macular degeneration
publisher BMC
series Journal of Biological Engineering
issn 1754-1611
publishDate 2017-08-01
description Abstract Background The configuration of necrotic areas within the retinal pigmented epithelium is an important element in the progression of age-related macular degeneration (AMD). In the exudative (wet) and non-exudative (dry) forms of the disease, retinal pigment epithelial (RPE) cells respond to adjacent atrophied regions by secreting vascular endothelial growth factor (VEGF) that in turn recruits new blood vessels which lead to a further reduction in retinal function and vision. In vitro models exist for studying VEGF expression in wet AMD (Vargis et al., Biomaterials 35(13):3999–4004, 2014), but are limited in the patterns of necrotic and intact RPE epithelium they can produce and in their ability to finely resolve VEGF expression dynamics. Results In this work, an in silico hybrid agent-based model was developed and validated using the results of this cell culture model of VEGF expression in AMD. The computational model was used to extend the cell culture investigation to explore the dynamics of VEGF expression in different sized patches of RPE cells and the role of negative feedback in VEGF expression. Results of the simulation and the cell culture studies were in excellent qualitative agreement, and close quantitative agreement. Conclusions The model indicated that the configuration of necrotic and RPE cell-containing regions have a major impact on VEGF expression dynamics and made precise predictions of VEGF expression dynamics by groups of RPE cells of various sizes and configurations. Coupled with biological studies, this model may give insights into key molecular mechanisms of AMD progression and open routes to more effective treatments.
topic Micropatterning
Auto-regulation
Vascular endothelial growth factor
Age-related macular degeneration
Retinal pigment epithelial cells
Age-related macular degeneration
url http://link.springer.com/article/10.1186/s13036-017-0063-6
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