A generalization of t-SNE and UMAP to single-cell multimodal omics

A generalization of t-SNE and UMAP to single-cell multimodal omics

Abstract Emerging single-cell technologies profile multiple types of molecules within individual cells. A fundamental step in the analysis of the produced high-dimensional data is their visualization using dimensionality reduction techniques such as t-SNE and UMAP. We introduce j-SNE and j-UMAP as t...

Full description

Bibliographic Details
Main Authors: Van Hoan Do, Stefan Canzar
Format: Article
Language:English
Published: BMC 2021-05-01
Series:Genome Biology
Subjects:
Data visualization
Single-cell sequencing
Multimodal omics
t-SNE
UMAP
RNA velocity
Online Access:https://doi.org/10.1186/s13059-021-02356-5

Internet

https://doi.org/10.1186/s13059-021-02356-5

Similar Items