A hybrid and scalable error correction algorithm for indel and substitution errors of long reads

Abstract Background Long-read sequencing has shown the promises to overcome the short length limitations of second-generation sequencing by providing more complete assembly. However, the computation of the long sequencing reads is challenged by their higher error rates (e.g., 13% vs. 1%) and higher...

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Bibliographic Details
Main Authors: Arghya Kusum Das, Sayan Goswami, Kisung Lee, Seung-Jong Park
Format: Article
Language:English
Published: BMC 2019-12-01
Series:BMC Genomics
Subjects:
Online Access:https://doi.org/10.1186/s12864-019-6286-9