Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States

Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States

Increasingly, routine surveillance and monitoring of foodborne pathogens using whole-genome sequencing is creating opportunities to study foodborne illness epidemiology beyond routine outbreak investigations and case–control studies. Using a global phylogeny of Salmonella enterica serotype Typhimuri...

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Bibliographic Details
Main Authors: Shaokang Zhang, Shaoting Li, Weidong Gu, Henk den Bakker, Dave Boxrud, Angie Taylor, Chandler Roe, Elizabeth Driebe, David M. Engelthaler, Marc Allard, Eric Brown, Patrick McDermott, Shaohua Zhao, Beau B. Bruce, Eija Trees, Patricia I. Fields, Xiangyu Deng
Format: Article
Language:English
Published: Centers for Disease Control and Prevention 2019-01-01
Series:Emerging Infectious Diseases
Subjects:
Salmonella
source attribution
Salmonella enterica serotype Typhimurium
population structure
machine learning
whole-genome sequencing
Online Access:https://wwwnc.cdc.gov/eid/article/25/1/18-0835_article

Internet

https://wwwnc.cdc.gov/eid/article/25/1/18-0835_article

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