TCC-GUI: a Shiny-based application for differential expression analysis of RNA-Seq count data

TCC-GUI: a Shiny-based application for differential expression analysis of RNA-Seq count data

Abstract Objective Differential expression (DE) is a fundamental step in the analysis of RNA-Seq count data. We had previously developed an R/Bioconductor package (called TCC) for this purpose. While this package has the unique feature of an in-built robust normalization method, its use has so far b...

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Bibliographic Details
Main Authors: Wei Su, Jianqiang Sun, Kentaro Shimizu, Koji Kadota
Format: Article
Language:English
Published: BMC 2019-03-01
Series:BMC Research Notes
Subjects:
RNA-Seq
Bioinformatics
Differential expression analysis
Shiny app
Online Access:http://link.springer.com/article/10.1186/s13104-019-4179-2

Internet

http://link.springer.com/article/10.1186/s13104-019-4179-2

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