Evaluation of Salmonella Serotype Prediction With Multiplex Nanopore Sequencing

Evaluation of Salmonella Serotype Prediction With Multiplex Nanopore Sequencing

The use of whole genome sequencing (WGS) data generated by the long-read sequencing platform Oxford Nanopore Technologies (ONT) has been shown to provide reliable results for Salmonella serotype prediction in a previous study. To further meet the needs of industry for accurate, rapid, and cost-effic...

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Bibliographic Details
Main Authors: Xingwen Wu, Hao Luo, Feng Xu, Chongtao Ge, Shaoting Li, Xiangyu Deng, Martin Wiedmann, Robert C. Baker, Abigail Stevenson, Guangtao Zhang, Silin Tang
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Microbiology
Subjects:
whole genome sequencing
Oxford Nanopore Technologies
multiplex
Salmonella
subtyping
foodborne pathogens
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2021.637771/full

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https://www.frontiersin.org/articles/10.3389/fmicb.2021.637771/full

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