Improved Gossypium raimondii genome using a Hi-C-based proximity-guided assembly

Improved Gossypium raimondii genome using a Hi-C-based proximity-guided assembly

Abstract Introduction Genome sequence plays an important role in both basic and applied studies. Gossypium raimondii, the putative contributor of the D subgenome of upland cotton (G. hirsutum), highlights the need to improve the genome quality rapidly and efficiently. Methods We performed Hi-C seque...

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Bibliographic Details
Main Authors: Qiuhong YANG, Dongyun ZUO, Hailiang CHENG, Youping ZHANG, Qiaolian WANG, Ashraf JAVARIA, Xiaoxu FENG, Simin LI, Xiaoqin CHEN, Shang LIU, Guoli SONG
Format: Article
Language:English
Published: BMC 2021-08-01
Series:Journal of Cotton Research
Subjects:
Gossypium raimondii
Hi-C
Genome assembly
Heatmap and collinearity
Online Access:https://doi.org/10.1186/s42397-021-00096-2

Internet

https://doi.org/10.1186/s42397-021-00096-2

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