Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach

Abstract Background B cell receptor Immunoglobulin (BcR IG) repertoire of Chronic Lymphocytic Leukemia (CLL) is characterized by the expression of quasi-identical BcR IG. These are observed in approximately 30% of patients, defined as stereotyped receptors and subdivided into subsets based on specif...

Full description

Bibliographic Details
Main Authors: Monica Colombo, Davide Bagnara, Daniele Reverberi, Serena Matis, Martina Cardillo, Rosanna Massara, Luca Mastracci, Jean Louis Ravetti, Luca Agnelli, Antonino Neri, Michela Mazzocco, Margherita Squillario, Andrea Nicola Mazzarello, Giovanna Cutrona, Andreas Agathangelidis, Kostas Stamatopoulos, Manlio Ferrarini, Franco Fais
Format: Article
Language:English
Published: BMC 2020-03-01
Series:Molecular Medicine
Online Access:http://link.springer.com/article/10.1186/s10020-020-00151-9
id doaj-399fdc618149481585e372527a30fd1b
record_format Article
spelling doaj-399fdc618149481585e372527a30fd1b2020-11-25T01:48:40ZengBMCMolecular Medicine1076-15511528-36582020-03-0126111010.1186/s10020-020-00151-9Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approachMonica Colombo0Davide Bagnara1Daniele Reverberi2Serena Matis3Martina Cardillo4Rosanna Massara5Luca Mastracci6Jean Louis Ravetti7Luca Agnelli8Antonino Neri9Michela Mazzocco10Margherita Squillario11Andrea Nicola Mazzarello12Giovanna Cutrona13Andreas Agathangelidis14Kostas Stamatopoulos15Manlio Ferrarini16Franco Fais17U.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoDepartment of Experimental Medicine, University of GenoaU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoU.O. Pathology, IRCCS Ospedale Policlinico San MartinoU.O. Pathology, IRCCS Ospedale Policlinico San MartinoDepartment of Oncology and Hemato-oncology, University of MilanDepartment of Oncology and Hemato-oncology, University of MilanU.O. Laboratorio di Istocompatibilità, E.O. Ospedali GallieraDepartment of Informatic Bioengeneering, Robotic and System Engeneering, University of GenoaThe Feinstein Institute for Medical ResearchU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoInstitute of Applied Biosciences, Center for Research and Technology Hellas CERTHInstitute of Applied Biosciences, Center for Research and Technology Hellas CERTHDepartment of Experimental Medicine, University of GenoaU.O. Molecular Pathology, IRCCS Ospedale Policlinico San MartinoAbstract Background B cell receptor Immunoglobulin (BcR IG) repertoire of Chronic Lymphocytic Leukemia (CLL) is characterized by the expression of quasi-identical BcR IG. These are observed in approximately 30% of patients, defined as stereotyped receptors and subdivided into subsets based on specific VH CDR3 aa motifs and phylogenetically related IGHV genes. Although relevant to CLL ontogeny, the distribution of CLL-biased stereotyped immunoglobulin rearrangements (CBS-IG) in normal B cells has not been so far specifically addressed using modern sequencing technologies. Here, we have investigated the presence of CBS-IG in splenic B cell subpopulations (s-BCS) and in CD5+ and CD5− B cells from the spleen and peripheral blood (PB). Methods Fractionation of splenic B cells into 9 different B cell subsets and that of spleen and PB into CD5+ and CD5− cells were carried out by FACS sorting. cDNA sequences of BcR IG gene rearrangements were obtained by NGS. Identification of amino acidic motifs typical of CLL stereotyped subsets was carried out on IGHV1-carrying gene sequences and statistical evaluation has been subsequently performed to assess stereotypes distribution. Results CBS-IG represented the 0.26% average of IGHV1 genes expressing sequences, were detected in all of the BCS investigated. CBS-IG were more abundant in splenic and circulating CD5+ B (0.57%) cells compared to CD5− B cells (0.17%). In all instances, most CBS IG did not exhibit somatic hypermutation similar to CLL stereotyped receptors. However, compared to CLL, they exhibited a different CLL subset distribution and a broader utilization of the genes of the IGHV1 family. Conclusions CBS-IG receptors appear to represent a part of the “public” BcR repertoire in normal B cells. This repertoire is observed in all BCS excluding the hypothesis that CLL stereotyped BcR accumulate in a specific B cell subset, potentially capable of originating a leukemic clone. The different relative representation of CBS-IG in normal B cell subgroups suggests the requirement for additional selective processes before a full transformation into CLL is achieved.http://link.springer.com/article/10.1186/s10020-020-00151-9
collection DOAJ
language English
format Article
sources DOAJ
author Monica Colombo
Davide Bagnara
Daniele Reverberi
Serena Matis
Martina Cardillo
Rosanna Massara
Luca Mastracci
Jean Louis Ravetti
Luca Agnelli
Antonino Neri
Michela Mazzocco
Margherita Squillario
Andrea Nicola Mazzarello
Giovanna Cutrona
Andreas Agathangelidis
Kostas Stamatopoulos
Manlio Ferrarini
Franco Fais
spellingShingle Monica Colombo
Davide Bagnara
Daniele Reverberi
Serena Matis
Martina Cardillo
Rosanna Massara
Luca Mastracci
Jean Louis Ravetti
Luca Agnelli
Antonino Neri
Michela Mazzocco
Margherita Squillario
Andrea Nicola Mazzarello
Giovanna Cutrona
Andreas Agathangelidis
Kostas Stamatopoulos
Manlio Ferrarini
Franco Fais
Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
Molecular Medicine
author_facet Monica Colombo
Davide Bagnara
Daniele Reverberi
Serena Matis
Martina Cardillo
Rosanna Massara
Luca Mastracci
Jean Louis Ravetti
Luca Agnelli
Antonino Neri
Michela Mazzocco
Margherita Squillario
Andrea Nicola Mazzarello
Giovanna Cutrona
Andreas Agathangelidis
Kostas Stamatopoulos
Manlio Ferrarini
Franco Fais
author_sort Monica Colombo
title Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
title_short Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
title_full Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
title_fullStr Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
title_full_unstemmed Tracing CLL-biased stereotyped immunoglobulin gene rearrangements in normal B cell subsets using a high-throughput immunogenetic approach
title_sort tracing cll-biased stereotyped immunoglobulin gene rearrangements in normal b cell subsets using a high-throughput immunogenetic approach
publisher BMC
series Molecular Medicine
issn 1076-1551
1528-3658
publishDate 2020-03-01
description Abstract Background B cell receptor Immunoglobulin (BcR IG) repertoire of Chronic Lymphocytic Leukemia (CLL) is characterized by the expression of quasi-identical BcR IG. These are observed in approximately 30% of patients, defined as stereotyped receptors and subdivided into subsets based on specific VH CDR3 aa motifs and phylogenetically related IGHV genes. Although relevant to CLL ontogeny, the distribution of CLL-biased stereotyped immunoglobulin rearrangements (CBS-IG) in normal B cells has not been so far specifically addressed using modern sequencing technologies. Here, we have investigated the presence of CBS-IG in splenic B cell subpopulations (s-BCS) and in CD5+ and CD5− B cells from the spleen and peripheral blood (PB). Methods Fractionation of splenic B cells into 9 different B cell subsets and that of spleen and PB into CD5+ and CD5− cells were carried out by FACS sorting. cDNA sequences of BcR IG gene rearrangements were obtained by NGS. Identification of amino acidic motifs typical of CLL stereotyped subsets was carried out on IGHV1-carrying gene sequences and statistical evaluation has been subsequently performed to assess stereotypes distribution. Results CBS-IG represented the 0.26% average of IGHV1 genes expressing sequences, were detected in all of the BCS investigated. CBS-IG were more abundant in splenic and circulating CD5+ B (0.57%) cells compared to CD5− B cells (0.17%). In all instances, most CBS IG did not exhibit somatic hypermutation similar to CLL stereotyped receptors. However, compared to CLL, they exhibited a different CLL subset distribution and a broader utilization of the genes of the IGHV1 family. Conclusions CBS-IG receptors appear to represent a part of the “public” BcR repertoire in normal B cells. This repertoire is observed in all BCS excluding the hypothesis that CLL stereotyped BcR accumulate in a specific B cell subset, potentially capable of originating a leukemic clone. The different relative representation of CBS-IG in normal B cell subgroups suggests the requirement for additional selective processes before a full transformation into CLL is achieved.
url http://link.springer.com/article/10.1186/s10020-020-00151-9
work_keys_str_mv AT monicacolombo tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT davidebagnara tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT danielereverberi tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT serenamatis tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT martinacardillo tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT rosannamassara tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT lucamastracci tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT jeanlouisravetti tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT lucaagnelli tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT antoninoneri tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT michelamazzocco tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT margheritasquillario tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT andreanicolamazzarello tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT giovannacutrona tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT andreasagathangelidis tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT kostasstamatopoulos tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT manlioferrarini tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
AT francofais tracingcllbiasedstereotypedimmunoglobulingenerearrangementsinnormalbcellsubsetsusingahighthroughputimmunogeneticapproach
_version_ 1725010885228888064