LocText: relation extraction of protein localizations to assist database curation

LocText: relation extraction of protein localizations to assist database curation

Abstract Background The subcellular localization of a protein is an important aspect of its function. However, the experimental annotation of locations is not even complete for well-studied model organisms. Text mining might aid database curators to add experimental annotations from the scientific l...

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Bibliographic Details
Main Authors: Juan Miguel Cejuela, Shrikant Vinchurkar, Tatyana Goldberg, Madhukar Sollepura Prabhu Shankar, Ashish Baghudana, Aleksandar Bojchevski, Carsten Uhlig, André Ofner, Pandu Raharja-Liu, Lars Juhl Jensen, Burkhard Rost
Format: Article
Language:English
Published: BMC 2018-01-01
Series:BMC Bioinformatics
Subjects:
Relation extraction
Text mining
Protein
Subcellular localization
GO
Annotations
Online Access:http://link.springer.com/article/10.1186/s12859-018-2021-9

Internet

http://link.springer.com/article/10.1186/s12859-018-2021-9

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