FastViromeExplorer: a pipeline for virus and phage identification and abundance profiling in metagenomics data

With the increase in the availability of metagenomic data generated by next generation sequencing, there is an urgent need for fast and accurate tools for identifying viruses in host-associated and environmental samples. In this paper, we developed a stand-alone pipeline called FastViromeExplorer fo...

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Bibliographic Details
Main Authors: Saima Sultana Tithi, Frank O. Aylward, Roderick V. Jensen, Liqing Zhang
Format: Article
Language:English
Published: PeerJ Inc. 2018-01-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/4227.pdf