RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics

RNA-seq, de novo transcriptome assembly and flavonoid gene analysis in 13 wild and cultivated berry fruit species with high content of phenolics

Abstract Background Flavonoids are produced in all flowering plants in a wide range of tissues including in berry fruits. These compounds are of considerable interest for their biological activities, health benefits and potential pharmacological applications. However, transcriptomic and genomic reso...

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Bibliographic Details
Main Authors: Vera Thole, Jean-Etienne Bassard, Ricardo Ramírez-González, Martin Trick, Bijan Ghasemi Afshar, Dario Breitel, Lionel Hill, Alexandre Foito, Louise Shepherd, Sabine Freitag, Cláudia Nunes dos Santos, Regina Menezes, Pilar Bañados, Michael Naesby, Liangsheng Wang, Artem Sorokin, Olga Tikhonova, Tatiana Shelenga, Derek Stewart, Philippe Vain, Cathie Martin
Format: Article
Language:English
Published: BMC 2019-12-01
Series:BMC Genomics
Subjects:
13 berry fruit species
RNA-seq
de novo assembly
Anthocyanin
Gene expression analysis
Fruit ripening
Online Access:https://doi.org/10.1186/s12864-019-6183-2

Internet

https://doi.org/10.1186/s12864-019-6183-2

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