A protocol for CABS-dock protein–peptide docking driven by side-chain contact information

A protocol for CABS-dock protein–peptide docking driven by side-chain contact information

Abstract Background The characterization of protein–peptide interactions is a challenge for computational molecular docking. Protein–peptide docking tools face at least two major difficulties: (1) efficient sampling of large-scale conformational changes induced by binding and (2) selection of the be...

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Bibliographic Details
Main Authors: Mateusz Kurcinski, Maciej Blaszczyk, Maciej Pawel Ciemny, Andrzej Kolinski, Sebastian Kmiecik
Format: Article
Language:English
Published: BMC 2017-08-01
Series:BioMedical Engineering OnLine
Subjects:
Protein–peptide interactions
Molecular docking
Flexible docking
Protein–peptide complexes
Online Access:http://link.springer.com/article/10.1186/s12938-017-0363-6

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http://link.springer.com/article/10.1186/s12938-017-0363-6

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