MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography

MAL and MyD88 are downstream adaptors of Toll-like receptors (TLR) and the MAL TIR domain forms filaments in vitro, which in turn nucleate the assembly of crystalline arrays of the MyD88 TIR domain. Here, the authors present the structure of these MyD88 TIR crystalline arrays solved by both microcry...

Full description

Bibliographic Details
Main Authors: Max T. B. Clabbers, Susannah Holmes, Timothy W. Muusse, Parimala R. Vajjhala, Sara J. Thygesen, Alpeshkumar K. Malde, Dominic J. B. Hunter, Tristan I. Croll, Leonie Flueckiger, Jeffrey D. Nanson, Md. Habibur Rahaman, Andrew Aquila, Mark S. Hunter, Mengning Liang, Chun Hong Yoon, Jingjing Zhao, Nadia A. Zatsepin, Brian Abbey, Emma Sierecki, Yann Gambin, Katryn J. Stacey, Connie Darmanin, Bostjan Kobe, Hongyi Xu, Thomas Ve
Format: Article
Language:English
Published: Nature Publishing Group 2021-05-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-021-22590-6
id doaj-5393cc79aa8d46d7b03a93a616d4e3b9
record_format Article
spelling doaj-5393cc79aa8d46d7b03a93a616d4e3b92021-05-11T14:48:36ZengNature Publishing GroupNature Communications2041-17232021-05-0112111410.1038/s41467-021-22590-6MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallographyMax T. B. Clabbers0Susannah Holmes1Timothy W. Muusse2Parimala R. Vajjhala3Sara J. Thygesen4Alpeshkumar K. Malde5Dominic J. B. Hunter6Tristan I. Croll7Leonie Flueckiger8Jeffrey D. Nanson9Md. Habibur Rahaman10Andrew Aquila11Mark S. Hunter12Mengning Liang13Chun Hong Yoon14Jingjing Zhao15Nadia A. Zatsepin16Brian Abbey17Emma Sierecki18Yann Gambin19Katryn J. Stacey20Connie Darmanin21Bostjan Kobe22Hongyi Xu23Thomas Ve24Department of Materials and Environmental Chemistry, Stockholm UniversityAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe UniversitySchool of Chemistry and Molecular Biosciences, The University of QueenslandSchool of Chemistry and Molecular Biosciences, The University of QueenslandSchool of Chemistry and Molecular Biosciences, The University of QueenslandInstitute for Glycomics, Griffith UniversitySchool of Chemistry and Molecular Biosciences, The University of QueenslandCambridge Institute for Medical Research, University of CambridgeAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe UniversitySchool of Chemistry and Molecular Biosciences, The University of QueenslandSchool of Chemistry and Molecular Biosciences, The University of QueenslandLinac Coherent Light Source, SLAC National Accelerator LaboratoryLinac Coherent Light Source, SLAC National Accelerator LaboratoryLinac Coherent Light Source, SLAC National Accelerator LaboratoryLinac Coherent Light Source, SLAC National Accelerator LaboratoryDepartment of Materials and Environmental Chemistry, Stockholm UniversityAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe UniversityAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe UniversityEMBL Australia Node in Single Molecule Science, University of New South WalesEMBL Australia Node in Single Molecule Science, University of New South WalesSchool of Chemistry and Molecular Biosciences, The University of QueenslandAustralian Research Council Centre of Excellence in Advanced Molecular Imaging, Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe UniversitySchool of Chemistry and Molecular Biosciences, The University of QueenslandDepartment of Materials and Environmental Chemistry, Stockholm UniversityInstitute for Glycomics, Griffith UniversityMAL and MyD88 are downstream adaptors of Toll-like receptors (TLR) and the MAL TIR domain forms filaments in vitro, which in turn nucleate the assembly of crystalline arrays of the MyD88 TIR domain. Here, the authors present the structure of these MyD88 TIR crystalline arrays solved by both microcrystal electron diffraction and serial femtosecond crystallography, and they show with mutagenesis experiments that MyD88 interface residues are important for TLR4 signaling in vivo.https://doi.org/10.1038/s41467-021-22590-6
collection DOAJ
language English
format Article
sources DOAJ
author Max T. B. Clabbers
Susannah Holmes
Timothy W. Muusse
Parimala R. Vajjhala
Sara J. Thygesen
Alpeshkumar K. Malde
Dominic J. B. Hunter
Tristan I. Croll
Leonie Flueckiger
Jeffrey D. Nanson
Md. Habibur Rahaman
Andrew Aquila
Mark S. Hunter
Mengning Liang
Chun Hong Yoon
Jingjing Zhao
Nadia A. Zatsepin
Brian Abbey
Emma Sierecki
Yann Gambin
Katryn J. Stacey
Connie Darmanin
Bostjan Kobe
Hongyi Xu
Thomas Ve
spellingShingle Max T. B. Clabbers
Susannah Holmes
Timothy W. Muusse
Parimala R. Vajjhala
Sara J. Thygesen
Alpeshkumar K. Malde
Dominic J. B. Hunter
Tristan I. Croll
Leonie Flueckiger
Jeffrey D. Nanson
Md. Habibur Rahaman
Andrew Aquila
Mark S. Hunter
Mengning Liang
Chun Hong Yoon
Jingjing Zhao
Nadia A. Zatsepin
Brian Abbey
Emma Sierecki
Yann Gambin
Katryn J. Stacey
Connie Darmanin
Bostjan Kobe
Hongyi Xu
Thomas Ve
MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
Nature Communications
author_facet Max T. B. Clabbers
Susannah Holmes
Timothy W. Muusse
Parimala R. Vajjhala
Sara J. Thygesen
Alpeshkumar K. Malde
Dominic J. B. Hunter
Tristan I. Croll
Leonie Flueckiger
Jeffrey D. Nanson
Md. Habibur Rahaman
Andrew Aquila
Mark S. Hunter
Mengning Liang
Chun Hong Yoon
Jingjing Zhao
Nadia A. Zatsepin
Brian Abbey
Emma Sierecki
Yann Gambin
Katryn J. Stacey
Connie Darmanin
Bostjan Kobe
Hongyi Xu
Thomas Ve
author_sort Max T. B. Clabbers
title MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
title_short MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
title_full MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
title_fullStr MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
title_full_unstemmed MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
title_sort myd88 tir domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2021-05-01
description MAL and MyD88 are downstream adaptors of Toll-like receptors (TLR) and the MAL TIR domain forms filaments in vitro, which in turn nucleate the assembly of crystalline arrays of the MyD88 TIR domain. Here, the authors present the structure of these MyD88 TIR crystalline arrays solved by both microcrystal electron diffraction and serial femtosecond crystallography, and they show with mutagenesis experiments that MyD88 interface residues are important for TLR4 signaling in vivo.
url https://doi.org/10.1038/s41467-021-22590-6
work_keys_str_mv AT maxtbclabbers myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT susannahholmes myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT timothywmuusse myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT parimalarvajjhala myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT sarajthygesen myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT alpeshkumarkmalde myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT dominicjbhunter myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT tristanicroll myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT leonieflueckiger myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT jeffreydnanson myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT mdhabiburrahaman myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT andrewaquila myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT markshunter myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT mengningliang myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT chunhongyoon myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT jingjingzhao myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT nadiaazatsepin myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT brianabbey myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT emmasierecki myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT yanngambin myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT katrynjstacey myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT conniedarmanin myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT bostjankobe myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT hongyixu myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
AT thomasve myd88tirdomainhigherorderassemblyinteractionsrevealedbymicrocrystalelectrondiffractionandserialfemtosecondcrystallography
_version_ 1721443992127668224