Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies

Geometrical <i>cis</i>- and <i>trans</i>- isomers of 2-chloro-, 2-bromo- and 2-fluoro-4-methyl-1,3,2-dioxaphosphorinan-2-thiones were obtained in a diastereoselective way by (a) sulfurization of corresponding cyclic P<sup>III</sup>-halogenides, (b) reaction of cyc...

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Main Authors: Marian Mikołajczyk, Barbara Ziemnicka, Jan Krzywański, Marek Cypryk, Bartłomiej Gostyński
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/26/12/3655
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spelling doaj-5569b5478ac54365af6a45b272d3217d2021-07-01T00:15:59ZengMDPI AGMolecules1420-30492021-06-01263655365510.3390/molecules26123655Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT StudiesMarian Mikołajczyk0Barbara Ziemnicka1Jan Krzywański2Marek Cypryk3Bartłomiej Gostyński4 Department of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódź, Poland Department of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódź, Poland Department of Organic Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódź, Poland Department of Structural Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódź, Poland Department of Structural Chemistry, Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363 Łódź, PolandGeometrical <i>cis</i>- and <i>trans</i>- isomers of 2-chloro-, 2-bromo- and 2-fluoro-4-methyl-1,3,2-dioxaphosphorinan-2-thiones were obtained in a diastereoselective way by (a) sulfurization of corresponding cyclic P<sup>III</sup>-halogenides, (b) reaction of cyclic phosphorothioic acids with phosphorus pentachloride and (c) halogen–halogen exchange at P<sup>IV</sup>-halogenide. Their conformation and configuration at the C<sub>4</sub>-ring carbon and phosphorus stereocentres were studied by NMR (<sup>1</sup>H, <sup>31</sup>P) methods, X-ray analysis and density functional (DFT) calculations. The stereochemistry of displacement reactions (alkaline hydrolysis, methanolysis, aminolysis) at phosphorus and its mechanism were shown to depend on the nature of halogen. Cyclic <i>cis</i>- and <i>trans</i>-isomers of chlorides and bromides react with nucleophiles (HO<sup>−</sup>, CH<sub>3</sub>O<sup>−</sup>, Me<sub>2</sub>NH) with inversion of configuration at phosphorus. DFT calculations provided evidence that alkaline hydrolysis of cyclic thiophosphoryl chlorides proceeds according to the S<sub>N</sub>2-P mechanism with a single transition state according to the potential energy surface (PES) observed. The alkaline hydrolysis reaction of <i>cis</i>- and <i>trans</i>-fluorides afforded the same mixture of the corresponding cyclic thiophosphoric acids with the thermodynamically more stable major product. Similar DFT calculations revealed that substitution at phosphorus in fluorides proceeds stepwise according to the A–E mechanism with formation of a pentacoordinate intermediate since a PES with two transition states was observed.https://www.mdpi.com/1420-3049/26/12/36552-halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thionesalkaline hydrolysismechanismstereochemistryDFT calculations
collection DOAJ
language English
format Article
sources DOAJ
author Marian Mikołajczyk
Barbara Ziemnicka
Jan Krzywański
Marek Cypryk
Bartłomiej Gostyński
spellingShingle Marian Mikołajczyk
Barbara Ziemnicka
Jan Krzywański
Marek Cypryk
Bartłomiej Gostyński
Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
Molecules
2-halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones
alkaline hydrolysis
mechanism
stereochemistry
DFT calculations
author_facet Marian Mikołajczyk
Barbara Ziemnicka
Jan Krzywański
Marek Cypryk
Bartłomiej Gostyński
author_sort Marian Mikołajczyk
title Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
title_short Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
title_full Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
title_fullStr Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
title_full_unstemmed Nucleophilic Substitution at Tetracoordinate Phosphorus. Stereochemical Course and Mechanisms of Nucleophilic Displacement Reactions at Phosphorus in Diastereomeric <i>cis</i>- and <i>trans</i>-2-Halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: Experimental and DFT Studies
title_sort nucleophilic substitution at tetracoordinate phosphorus. stereochemical course and mechanisms of nucleophilic displacement reactions at phosphorus in diastereomeric <i>cis</i>- and <i>trans</i>-2-halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones: experimental and dft studies
publisher MDPI AG
series Molecules
issn 1420-3049
publishDate 2021-06-01
description Geometrical <i>cis</i>- and <i>trans</i>- isomers of 2-chloro-, 2-bromo- and 2-fluoro-4-methyl-1,3,2-dioxaphosphorinan-2-thiones were obtained in a diastereoselective way by (a) sulfurization of corresponding cyclic P<sup>III</sup>-halogenides, (b) reaction of cyclic phosphorothioic acids with phosphorus pentachloride and (c) halogen–halogen exchange at P<sup>IV</sup>-halogenide. Their conformation and configuration at the C<sub>4</sub>-ring carbon and phosphorus stereocentres were studied by NMR (<sup>1</sup>H, <sup>31</sup>P) methods, X-ray analysis and density functional (DFT) calculations. The stereochemistry of displacement reactions (alkaline hydrolysis, methanolysis, aminolysis) at phosphorus and its mechanism were shown to depend on the nature of halogen. Cyclic <i>cis</i>- and <i>trans</i>-isomers of chlorides and bromides react with nucleophiles (HO<sup>−</sup>, CH<sub>3</sub>O<sup>−</sup>, Me<sub>2</sub>NH) with inversion of configuration at phosphorus. DFT calculations provided evidence that alkaline hydrolysis of cyclic thiophosphoryl chlorides proceeds according to the S<sub>N</sub>2-P mechanism with a single transition state according to the potential energy surface (PES) observed. The alkaline hydrolysis reaction of <i>cis</i>- and <i>trans</i>-fluorides afforded the same mixture of the corresponding cyclic thiophosphoric acids with the thermodynamically more stable major product. Similar DFT calculations revealed that substitution at phosphorus in fluorides proceeds stepwise according to the A–E mechanism with formation of a pentacoordinate intermediate since a PES with two transition states was observed.
topic 2-halogeno-4-methyl-1,3,2-dioxaphosphorinan-2-thiones
alkaline hydrolysis
mechanism
stereochemistry
DFT calculations
url https://www.mdpi.com/1420-3049/26/12/3655
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