Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture

Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture

Abstract Background Novel sequence motifs detection is becoming increasingly essential in computational biology. However, the high computational cost greatly constrains the efficiency of most motif discovery algorithms. Results In this paper, we accelerate MEME algorithm targeted on Intel Many Integ...

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Bibliographic Details
Main Authors: Shaoliang Peng, Minxia Cheng, Kaiwen Huang, YingBo Cui, Zhiqiang Zhang, Runxin Guo, Xiaoyu Zhang, Shunyun Yang, Xiangke Liao, Yutong Lu, Quan Zou, Benyun Shi
Format: Article
Language:English
Published: BMC 2018-08-01
Series:BMC Bioinformatics
Subjects:
MIC
MEME
Motif discovery
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Online Access:http://link.springer.com/article/10.1186/s12859-018-2276-1

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http://link.springer.com/article/10.1186/s12859-018-2276-1

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