Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource

Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource

We have characterized the simple sequence repeat (SSR) markers of the eggplant (Solanum melongena) using a recent high quality sequence of its whole genome. We found nearly 133,000 perfect SSRs, a density of 125.5 SSRs/Mbp, and also about 178,400 imperfect SSRs. Of the perfect SSRs, 15.6% were compl...

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Bibliographic Details
Main Authors: Ezio Portis, Sergio Lanteri, Lorenzo Barchi, Flavio Portis, Luisa Valente, Laura Toppino, Giuseppe L. Rotino, Alberto Acquadro
Format: Article
Language:English
Published: Frontiers Media S.A. 2018-03-01
Series:Frontiers in Plant Science
Subjects:
database
eggplant
genome
microsatellite
Solanum melongena
SSR
Online Access:http://journal.frontiersin.org/article/10.3389/fpls.2018.00401/full

Internet

http://journal.frontiersin.org/article/10.3389/fpls.2018.00401/full

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